RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RAPGEFL1Q9UHV5 662 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 PEX16Q9Y5Y5 336 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 A0A096LPI6 279 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 MYO1GB0I1T2 1018 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 E9PQ18 207 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 RPLP0P05388 317 aaKnown RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 C21orf33P30042 268 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 PIK3CGP48736 1102 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 LIMK1P53667 647 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 RACK1P63244 317 aaKnown RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 TTLL9Q3SXZ7 439 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 KBTBD8Q8NFY9 601 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 SKA2Q8WVK7 121 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 SDHCQ99643 169 aaPredicted RBP18.09■□□□□ 0.49
PSPC1-201ENST00000338910 COPS4Q9BT78 406 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 KCTD5Q9NXV2 234 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 DPP7Q9UHL4 492 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 SNX6Q9UNH7 406 aa18.09■□□□□ 0.49
PSPC1-201ENST00000338910 EVPLLA8MZ36 301 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 ALX3O95076 343 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 OTCP00480 354 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 MYCLP1P12525 358 aaPredicted RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 NNMTP40261 264 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 PBX2P40425 430 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 VIPR2P41587 438 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 CSNK2BP67870 215 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 RPP38P78345 283 aaKnown RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 DMC1Q14565 340 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 SHHQ15465 462 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 SOWAHCQ53LP3 525 aaPredicted RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 NXNL2Q5VZ03 156 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 HSD11B1LQ7Z5J1 315 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 GATAD2AQ86YP4 633 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 LIX1Q8N485 282 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 MRGPRX3Q96LB0 322 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 CD244Q9BZW8 370 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 RNF167Q9H6Y7 350 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 KRT84Q9NSB2 600 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 DDX28Q9NUL7 540 aaKnown RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 DKK3Q9UBP4 350 aa18.08■□□□□ 0.49
PSPC1-201ENST00000338910 SAMD4AQ9UPU9 718 aaKnown RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 WBP11Q9Y2W2 641 aaKnown RBP18.08■□□□□ 0.49
PSPC1-201ENST00000338910 FFAR3O14843 346 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 GPR42O15529 346 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 MRPS15P82914 257 aaKnown RBP18.08■□□□□ 0.48
PSPC1-201ENST00000338910 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 LRIF1Q5T3J3 769 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 Q6ZVL8 140 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 OTUB2Q96DC9 234 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 RSPRY1Q96DX4 576 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 ST6GAL2Q96JF0 529 aa18.08■□□□□ 0.48
PSPC1-201ENST00000338910 TMA7Q9Y2S6 64 aaKnown RBP18.08■□□□□ 0.48
PSPC1-201ENST00000338910 YBX2Q9Y2T7 364 aaKnown RBP18.08■□□□□ 0.48
PSPC1-201ENST00000338910 PNMA8CA0A1B0GUJ8 204 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 WASH3PC4AMC7 463 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ERN1O75460 977 aaKnown RBP18.07■□□□□ 0.48
PSPC1-201ENST00000338910 DIRAS1O95057 198 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF682O95780 498 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
PSPC1-201ENST00000338910 KRT6CP48668 564 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 NPRL3Q12980 569 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 MAD2L1Q13257 205 aaPredicted RBP18.07■□□□□ 0.48
PSPC1-201ENST00000338910 DHCR24Q15392 516 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 SMU1Q2TAY7 513 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ZFP69Q49AA0 526 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 TCEAL5Q5H9L2 206 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 BRAT1Q6PJG6 821 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 SUSD1Q6UWL2 747 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 CCDC190Q86UF4 302 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 CHCHD4Q8N4Q1 142 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 SIMC1Q8NDZ2 872 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ZFP14Q9HCL3 533 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 SERHLQ9NQF3 203 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 CCNDBP1O95273 360 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 CTSLP07711 333 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 OR56A5P0C7T3 313 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ETV3P41162 512 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 RPIAP49247 311 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ERVK-21P61565 698 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 SPANXN2Q5MJ10 180 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 PDE12Q6L8Q7 609 aaKnown RBP18.07■□□□□ 0.48
PSPC1-201ENST00000338910 CELF5Q8N6W0 485 aaKnown RBP18.07■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF557Q8N988 423 aaPredicted RBP18.07■□□□□ 0.48
PSPC1-201ENST00000338910 FAM83DQ9H4H8 585 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 SIRT5Q9NXA8 310 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 MARK1Q9P0L2 795 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 PSORS1C1Q9UIG5 152 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 LYVE1Q9Y5Y7 322 aa18.07■□□□□ 0.48
PSPC1-201ENST00000338910 LOC100506127A0A0U1RQW1 187 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 H3BQ06 376 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 AP3D1O14617 1153 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 WNT9AO14904 365 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 RGS14O43566 566 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SEMA3DO95025 777 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 DNTTP04053 509 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 HOXB9P17482 250 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 DDOSTP39656 456 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 UGT2B15P54855 530 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 HMGCS1Q01581 520 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms