RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RPL17P18621 184 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 MC3RP41968 323 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DNASE1L3Q13609 305 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ATPAF1Q5TC12 328 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 IRF2BP2Q7Z5L9 587 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DCSTAMPQ9H295 470 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 KCNJ16Q9NPI9 418 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 IL20Q9NYY1 176 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 HHLA1C9JL84 531 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 MEIS2O14770 477 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ICMTO60725 284 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 RAP2AP10114 183 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DNASE1L1P49184 302 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 SUMF2Q8NBJ7 301 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 OR51B5Q9H339 312 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 H3BUI4 141 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 XPNPEP2O43895 674 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 POP4O95707 220 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 HLA-EP13747 358 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GNB3P16520 340 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GSTM2P28161 218 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 AVPR1BP47901 424 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CAMLGP49069 296 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 HECTD2Q5U5R9 776 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FIP1L1Q6UN15 594 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DNASE1L2Q92874 299 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 SGK3Q96BR1 496 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ARMC5Q96C12 935 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 BCL7BQ9BQE9 202 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 SLC2A11Q9BYW1 496 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FFAR3O14843 346 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GPR42O15529 346 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 IL10RBQ08334 325 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 TAF1AQ15573 450 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FIGNL1Q6PIW4 674 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PLEKHG7Q6ZR37 379 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GAREM2Q75VX8 874 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GALNT13Q8IUC8 556 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PLPP5Q8NEB5 264 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FAM216AQ8WUB2 273 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF75AQ96N20 296 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FERD3LQ96RJ6 166 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PCDHGA9Q9Y5G4 932 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 WASH4PA8MWX3 477 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 PIP5K1CO60331 668 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SPTBP11277 2137 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 ANKRD22Q5VYY1 191 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC22A10Q63ZE4 541 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 GPR156Q8NFN8 814 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 RDH12Q96NR8 316 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 TMEM209Q96SK2 561 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC5A7Q9GZV3 580 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SMURF1Q9HCE7 757 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC22A20A6NK97 555 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 M0QZK8 103 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 GGCTO75223 188 aaKnown RBP9.44□□□□□ -0.9
COL12A1-201ENST00000322507 RAD51DO75771 328 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 LINC00032P0C843 101 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 KLRC4O43908 158 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 AFMIDQ63HM1 303 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 TMPRSS7Q7RTY8 843 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 PRRG4Q9BZD6 226 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 IPPKQ9H8X2 491 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 NALCNQ8IZF0 1738 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SHBGP04278 402 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 RPS19P39019 145 aaKnown RBP9.44□□□□□ -0.9
COL12A1-201ENST00000322507 RPIAP49247 311 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 PRAMEF13Q5VWM6 474 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 OR7D4Q8NG98 312 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 OR10T2Q8NGX3 314 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 MYLIPQ8WY64 445 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 NIFKQ9BYG3 293 aaKnown RBP9.44□□□□□ -0.9
COL12A1-201ENST00000322507 GPR88Q9GZN0 384 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 ZDHHC11Q9H8X9 412 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 VSTM5A8MXK1 200 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 NR4A2P43354 598 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC26A5P58743 744 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 TLE4Q04727 773 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 MAP2K5Q13163 448 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 PPIGQ13427 754 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL12A1-201ENST00000322507 FRRS1Q6ZNA5 592 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC24A5Q71RS6 500 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 KLHDC1Q8N7A1 406 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 NEUROD4Q9HD90 331 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 IFT52Q9Y366 437 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 CDH10Q9Y6N8 788 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 FAM234BA2RU67 622 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 PTPRAP18433 802 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC7A1P30825 629 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 CRISP3P54108 245 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 GTF2H2Q13888 395 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 DUSP28Q4G0W2 176 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 SLC30A6Q6NXT4 461 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 GTF2H2CQ6P1K8 395 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 TSTD1Q8NFU3 115 aa9.44□□□□□ -0.9
COL12A1-201ENST00000322507 FRZBQ92765 325 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms