RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 C1QTNF3Q9BXJ4 246 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PTPRFP10586 1907 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 K7ERQ8 282 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ORC5O43913 435 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 BPIP17213 487 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 TACR1P25103 407 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 GGT2P36268 569 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 MAPK12P53778 367 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 RPS13P62277 151 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 HSPB3Q12988 150 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 VEZF1Q14119 521 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 LIPJQ5W064 366 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PLEKHM3Q6ZWE6 761 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 KRT74Q7RTS7 529 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PEX5LQ8IYB4 626 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 KLHDC9Q8NEP7 349 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CCM2Q9BSQ5 444 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 SPATA9Q9BWV2 254 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 PAQR5Q9NXK6 330 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 ENTPD4Q9Y227 616 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 CMAHPQ9Y471 501 aa12.3□□□□□ -0.44
DNMT3A-202ENST00000321117 IGLV3-10A0A075B6K4 115 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 BTN3A3O00478 584 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CAPNS1P04632 268 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 C4BPBP20851 252 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CLCN7P51798 805 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SP140Q13342 867 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 ZSWIM7Q19AV6 140 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 PARP16Q8N5Y8 322 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TCEANCQ8N8B7 351 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TMEM80Q96HE8 168 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 BARD1Q99728 777 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TTYH2Q9BSA4 534 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 IRF2BPLQ9H1B7 796 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TBC1D17Q9HA65 648 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 NUP214P35658 2090 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SMIM30A4D0T7 59 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TRIM64CA6NLI5 447 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 DLGAP1O14490 977 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 GRM6O15303 877 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CDK1P06493 297 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SRPRAP08240 638 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC2A2P11168 524 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 GPR1P46091 355 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 KLHL22Q53GT1 634 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 RAET1GQ6H3X3 334 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CBLL1Q75N03 491 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 RNF130Q86XS8 419 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CFAP206Q8IYR0 622 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 UFD1Q92890 307 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 AP2M1Q96CW1 435 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 EFCAB11Q9BUY7 163 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 IKZF5Q9H5V7 419 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CTPS2Q9NRF8 586 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SOCS5O75159 536 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 ETFAP13804 333 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 FEN1P39748 380 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC11A1P49279 550 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 ACLYP53396 1101 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TAS2R41P59536 307 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 GNA13Q14344 377 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 SPHARQ15513 63 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 AGAP6Q5VW22 663 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 NADSYN1Q6IA69 706 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 METTL2BQ6P1Q9 378 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 Q6ZPB1 254 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 C17orf64Q86WR6 236 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 METTL4Q8N3J2 472 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 OR8H1Q8NGG4 311 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF419Q96HQ0 510 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 AGAP4Q96P64 663 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 BEX2Q9BXY8 128 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 LTBP1Q14766 1721 aa12.29□□□□□ -0.44
DNMT3A-202ENST00000321117 RPN2P04844 631 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PRR35P0CG20 571 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 FSHRP23945 695 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 RBBP4Q09028 425 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 DOC2AQ14183 400 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 UBE2UQ5VVX9 321 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 BHLHB9Q6PI77 547 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CYHR1Q6ZMK1 362 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 BHLHA9Q7RTU4 235 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PJA1Q8NG27 643 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 TESCQ96BS2 214 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 EPYCQ99645 322 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PIP5K1AQ99755 562 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 DUSP21Q9H596 190 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 FBXO8Q9NRD0 319 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 TLX2O43763 284 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 STX11O75558 287 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 BCHEP06276 602 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 MYL9P24844 172 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms