RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 HIST1H2AGP0C0S8 130 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HIST1H2ADP20671 130 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HNMTP50135 292 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 MAPK10P53779 464 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HMGCS1Q01581 520 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 TAGLNQ01995 201 aaKnown RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 INPP5AQ14642 412 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PLA2G4EQ3MJ16 856 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 AGAP6Q5VW22 663 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PNCKQ6P2M8 343 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 ADAMTSL4Q6UY14 1074 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 SNX29P2Q8IUI4 249 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 CFAP206Q8IYR0 622 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 LMNTD1Q8N9Z9 388 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 IL17RCQ8NAC3 791 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 FNDC5Q8NAU1 212 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 MCOLN3Q8TDD5 553 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HIST1H2AHQ96KK5 128 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 LINC00615Q96LM1 132 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 AGAP4Q96P64 663 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 OR4K3Q96R72 315 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PKP4Q99569 1192 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HIST1H2AJQ99878 128 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 GABRG3Q99928 467 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 H2AFJQ9BTM1 129 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 TRIM54Q9BYV2 358 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 INTS7Q9NVH2 962 aaKnown RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 STOX2Q9P2F5 926 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 A0A1W2PQF6 199 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 POP7O75817 140 aaKnown RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 CLDN9O95484 217 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 ADH1BP00325 375 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 CD22P20273 847 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 C5AR1P21730 350 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 CRHBPP24387 322 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HTR1BP28222 390 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 IMPA1P29218 277 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 RPS9P46781 194 aaKnown RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 AP2S1P53680 142 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 EMX2Q04743 252 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PON2Q15165 354 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 NR6A1Q15406 480 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 SMU1Q2TAY7 513 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 SPATS1Q496A3 300 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 ATP6AP1LQ52LC2 224 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 SGO1Q5FBB7 561 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 TBCELQ5QJ74 424 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 TRIM46Q7Z4K8 759 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 KLHDC8AQ8IYD2 350 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 CHCHD4Q8N4Q1 142 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 TRPV3Q8NET8 790 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PROKR1Q8TCW9 393 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 SLC29A3Q9BZD2 475 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 ATP13A2Q9NQ11 1180 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PAK1IP1Q9NWT1 392 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 SLC23A2Q9UGH3 650 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF490Q9ULM2 529 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 POLR3HQ9Y535 204 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-201ENST00000317677 DGKBQ9Y6T7 804 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 OR5K3A6NET4 321 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 SHISA7A6NL88 538 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 PCDH8O95206 1070 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 PDYNP01213 254 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 NAT2P11245 290 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 G6PDP11413 515 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 EEF1B2P24534 225 aaKnown RBP12.55□□□□□ -0.4
CPNE1-201ENST00000317677 NTSR1P30989 418 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 CDK3Q00526 305 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 GRIK2Q13002 908 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 RCAN2Q14206 197 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 NFE2L1Q14494 772 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 CPSF6Q16630 551 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPNE1-201ENST00000317677 AP5B1Q2VPB7 878 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 GGTA1PQ4G0N0 100 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 DOK6Q6PKX4 331 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 AGTRAPQ6RW13 159 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 CYP2R1Q6VVX0 501 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 NUDT18Q6ZVK8 323 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 CHST15Q7LFX5 561 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-201ENST00000317677 RGL4Q8IZJ4 473 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 L3MBTL4Q8NA19 623 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 FIG4Q92562 907 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 KLK6Q92876 244 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
CPNE1-201ENST00000317677 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
CPNE1-201ENST00000317677 ACTR8Q9H981 624 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 DNAJC11Q9NVH1 559 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 NAALAD2Q9Y3Q0 740 aa12.55□□□□□ -0.4
CPNE1-201ENST00000317677 DHRS12A0PJE2 317 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 CENPXA8MT69 81 aa12.54□□□□□ -0.4
CPNE1-201ENST00000317677 H3BM21 787 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms