RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OLR1P78380 273 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 CDKL4Q5MAI5 379 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 GRTP1Q5TC63 336 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 CPEB2Q7Z5Q1 589 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 CCDC25Q86WR0 208 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 SIRT6Q8N6T7 355 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 PPM1NQ8N819 430 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 PDPRQ8NCN5 879 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 DNAJB14Q8TBM8 379 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 TSLPQ969D9 159 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 KIAA1191Q96A73 305 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 ESAMQ96AP7 390 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 TSPAN17Q96FV3 270 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 PEX11GQ96HA9 241 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 PSMG3-AS1Q96PY0 264 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 OR1F2PQ96R84 312 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 TUBB6Q9BUF5 446 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 RBCK1Q9BYM8 510 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 PTBP2Q9UKA9 531 aaKnown RBP18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 DYRK1BQ9Y463 629 aa18.68■□□□□ 0.58
PDZRN3-202ENST00000308537 NCF1BA6NI72 391 aaPredicted RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 NCF1CA8MVU1 366 aaPredicted RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 E2F3O00716 465 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 CHST10O43529 356 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 SEMA7AO75326 666 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 SEC24DO94855 1032 aaPredicted RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 WDR47O94967 919 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 C1GALT1C1LP0DN25 315 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 NCF1P14598 390 aaPredicted RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 CD22P20273 847 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 SPRP35270 261 aaPredicted RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 ATP6V0D1P61421 351 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 E2F2Q14209 437 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 ZNF169Q14929 603 aaPredicted RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 MINDY4Q4G0A6 757 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 ADNP2Q6IQ32 1131 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 ISCA2Q86U28 154 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 CTAGE3PQ8IX95 158 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 NOA1Q8NC60 698 aaKnown RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 NPAS2Q99743 824 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 AIF1LQ9BQI0 150 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 EPS8L2Q9H6S3 715 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 IGSF5Q9NSI5 407 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 PTGFRNQ9P2B2 879 aa18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 DMGDHQ9UI17 866 aaKnown RBP18.67■□□□□ 0.58
PDZRN3-202ENST00000308537 DIDO1Q9BTC0 2240 aaKnown RBP18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 FHP07954 510 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 SERPINA6P08185 405 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 GNAZP19086 355 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 IL10P22301 178 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 ECHS1P30084 290 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 SLC12A2P55011 1212 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 RAB8AP61006 207 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 CKAP4Q07065 602 aaKnown RBP18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 RGS1Q08116 209 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 CDC16Q13042 620 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 IRAK1BP1Q5VVH5 260 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 PLAG1Q6DJT9 500 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 H3F3CQ6NXT2 135 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 C8orf74Q6P047 294 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 FRA10AC1Q70Z53 315 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 CENPLQ8N0S6 344 aaPredicted RBP18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 TRPV3Q8NET8 790 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 HAS2Q92819 552 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 TRIM44Q96DX7 344 aaPredicted RBP18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 WDR34Q96EX3 536 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 ATOH8Q96SQ7 321 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 PLA2G3Q9NZ20 509 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 GPRC5BQ9NZH0 403 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 TXNDC16Q9P2K2 825 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 CLDN16Q9Y5I7 305 aa18.66■□□□□ 0.58
PDZRN3-202ENST00000308537 IGKV3D-11A0A0A0MRZ8 115 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 MAGEB17A8MXT2 336 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 CDC123O75794 336 aaPredicted RBP18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 SERPIND1P05546 499 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 HNRNPH1P31943 449 aaKnown RBP18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 STX2P32856 288 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 GLRBP48167 497 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 HSPA7P48741 367 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 TNFSF10P50591 281 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 NAB1Q13506 487 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 SLBPQ14493 270 aaKnown RBP eCLIP18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 TLR1Q15399 786 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 NR6A1Q15406 480 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 WHAMMP3Q1A5X7 153 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 EIF2S3LQ2VIR3 472 aaKnown RBP18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 ADPRMQ3LIE5 342 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 SULT1C3Q6IMI6 304 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 GPSM1Q86YR5 675 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 RELL1Q8IUW5 271 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 MMGT1Q8N4V1 131 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 TBC1D20Q96BZ9 403 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 FUT8Q9BYC5 575 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 RNF32Q9H0A6 362 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 EHD1Q9H4M9 534 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 NT5DC2Q9H857 520 aa18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 ZNF490Q9ULM2 529 aaPredicted RBP18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 COPG1Q9Y678 874 aaKnown RBP18.65■□□□□ 0.58
PDZRN3-202ENST00000308537 URI1O94763 535 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms