RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 WDPCPO95876 746 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 GNAZP19086 355 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 GJA5P36382 358 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 FLT3LGP49771 235 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 AP1S1P61966 158 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 FIGNL1Q6PIW4 674 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 OR51A7Q8NH64 312 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF675Q8TD23 568 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 NKD2Q969F2 451 aaPredicted RBP11.98□□□□□ -0.49
ABCA3-201ENST00000301732 TREX2Q9BQ50 279 aaPredicted RBP11.98□□□□□ -0.49
ABCA3-201ENST00000301732 STRA6Q9BX79 667 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 MMP28Q9H239 520 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 RGCCQ9H4X1 137 aa11.98□□□□□ -0.49
ABCA3-201ENST00000301732 CAPNS1P04632 268 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ZBTB48P10074 688 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 HLA-EP13747 358 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 AOC1P19801 751 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ASPAP45381 313 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 KCNQ1P51787 676 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GRIK2Q13002 908 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 HNF4GQ14541 408 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF557Q8N988 423 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 NAT8LQ8N9F0 302 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 NDC1Q9BTX1 674 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ARL6Q9H0F7 186 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 HCN3Q9P1Z3 774 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 CFL2Q9Y281 166 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 MEIS3P2A8K0S8 358 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 FBP2O00757 339 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 KAT7O95251 611 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 NCBP2-AS2Q69YL0 99 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 CCDC107Q8WV48 283 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 C1orf21Q9H246 121 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 NSUN3Q9H649 340 aaKnown RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 PIGVQ9NUD9 493 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 KLRF1Q9NZS2 232 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ERVK-19Q9WJR5 959 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 PCDHGA6Q9Y5G7 932 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 REREQ9P2R6 1566 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 M0R2N6 131 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 SOX1O00570 391 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 IL33O95760 270 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF35P13682 527 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 IMPDH1P20839 514 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 MPIP34949 423 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 PTGER1P34995 402 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 RBM34P42696 430 aaKnown RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GPD2P43304 727 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GALK2Q01415 458 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 RHEBQ15382 184 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 C18orf21Q32NC0 220 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 SOCS4Q8WXH5 440 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GTPBP2Q9BX10 602 aaKnown RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 RABL2AQ9UBK7 228 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 RUVBL1Q9Y265 456 aaKnown RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 WDR45Q9Y484 360 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 INMT-MINDY4F8WBC2 141 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 CXCL11O14625 94 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 SPDEFO95238 335 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 MATN1P21941 496 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 NCS1P62166 190 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GAS6Q14393 721 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GRB7Q14451 532 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 CDK10Q15131 360 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 TEAD4Q15561 434 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 CDNFQ49AH0 187 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 BORCS8Q96FH0 119 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 PRICKLE1Q96MT3 831 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF347Q96SE7 839 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 SPATA7Q9P0W8 599 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 LAMP5Q9UJQ1 280 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 MMP20O60882 483 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GLDCP23378 1020 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 PRDX6P30041 224 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ETV5P41161 510 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 GPR139Q6DWJ6 353 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 STK35Q8TDR2 534 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 TWNKQ96RR1 684 aa11.97□□□□□ -0.49
ABCA3-201ENST00000301732 HEMK1Q9Y5R4 338 aaPredicted RBP11.97□□□□□ -0.49
ABCA3-201ENST00000301732 POM121CA8CG34 1229 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 SOCS2O14508 198 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 HTRA2O43464 458 aaPredicted RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 STSP08842 583 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 CD53P19397 219 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 CDK6Q00534 326 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 UBXN2BQ14CS0 331 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 PHF19Q5T6S3 580 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 NIPAL1Q6NVV3 410 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 SAT2Q96F10 170 aaPredicted RBP11.96□□□□□ -0.49
ABCA3-201ENST00000301732 SARDHQ9UL12 918 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 RNF13O43567 381 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 AQP2P41181 271 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 PLGLB1Q02325 96 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 PTGR1Q14914 329 aa11.96□□□□□ -0.49
ABCA3-201ENST00000301732 IER5LQ5T953 404 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms