RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 GJD2Q9UKL4 321 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PCDHGB5Q9Y5G0 923 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ENTPD6O75354 484 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF227Q86WZ6 799 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CCDC116Q8IYX3 515 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC22A18Q96BI1 424 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SMOQ99835 787 aa13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
CHRFAM7A-201ENST00000299847 H7BY64 318 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SOX1O00570 391 aaPredicted RBP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PTGS2P35354 604 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ETV3P41162 512 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 KCNC4Q03721 635 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GPR33Q49SQ1 333 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C6orf183Q5T699 404 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TPGS2Q68CL5 300 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OTUB2Q96DC9 234 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 AURKBQ96GD4 344 aaPredicted RBP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PRAP1Q96NZ9 151 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FUZQ9BT04 418 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 BTBD1Q9H0C5 482 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 PLATP00750 562 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CDH11P55287 796 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CILP2Q8IUL8 1156 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CELF5Q8N6W0 485 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TCEANCQ8N8B7 351 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TXNRD2Q9NNW7 524 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NANSQ9NR45 359 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ALG5Q9Y673 324 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SPARCP09486 303 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR12D1P0DN82 309 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC6A4P31645 630 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HNRNPA0Q13151 305 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ADAM15Q13444 863 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF267Q14586 743 aaPredicted RBP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CYBRD1Q53TN4 286 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 C22orf39Q6P5X5 142 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FUBP3Q96I24 572 aaKnown RBP eCLIP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CYP8B1Q9UNU6 501 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ST14Q9Y5Y6 855 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HEXBP07686 556 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FHP07954 510 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FNTBP49356 437 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 RGS19P49795 217 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FXYD6P3P58550 94 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DECR1Q16698 335 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DPY19L1Q2PZI1 675 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GPRC6AQ5T6X5 926 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 AGTRAPQ6RW13 159 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 LRRC69Q6ZNQ3 347 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NLGN4XQ8N0W4 816 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR6N1Q8NGY5 312 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 NTAN1Q96AB6 310 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZBTB26Q9HCK0 441 aa13.13□□□□□ -0.31
CHRFAM7A-201ENST00000299847 WASHC1A8K0Z3 465 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF41P51814 821 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 EIF2S3LQ2VIR3 472 aaKnown RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF542PQ5EBM4 170 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 WASH2PQ6VEQ5 465 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SAMD14Q8IZD0 417 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TMEM80Q96HE8 168 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD244Q9BZW8 370 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TPT1P8Q9HAU6 139 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FAM72CH0Y354 149 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TFPTP0C1Z6 253 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD40LGP29965 261 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ARL3P36405 182 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HSD17B2P37059 387 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 IST1P53990 364 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 JAG1P78504 1218 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF678Q5SXM1 525 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FAM72AQ5TYM5 149 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FAM72DQ6L9T8 149 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 FAM72BQ86X60 149 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF565Q8N9K5 539 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TIGARQ9NQ88 270 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 DNAJB4Q9UDY4 337 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC22A1O15245 554 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GJB5O95377 273 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HTR1AP08908 422 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 SLC9A3P48764 834 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 OR6N2Q8NGY6 317 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 CD180Q99467 661 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 Q9N2J8 555 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZIM2Q9NZV7 527 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 ZNF451Q9Y4E5 1061 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 TEX13DA0A0J9YY54 714 aaPredicted RBP13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 HMGN1P05114 100 aa13.12□□□□□ -0.31
CHRFAM7A-201ENST00000299847 GP1BBP13224 206 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms