RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CLDN16Q9Y5I7 305 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 SETD2Q9BYW2 2564 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 SDR42E2A6NKP2 422 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ZNF839A8K0R7 811 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 GABRR3A8MPY1 467 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 NPIPA5E9PKD4 350 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 TXNDC9O14530 226 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ZBTB14O43829 449 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 CYC1P08574 325 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ICAM2P13598 275 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 PTGER4P35408 488 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 SLC26A5P58743 744 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 BTG2P78543 158 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 CCZ1BP86790 482 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 CCZ1P86791 482 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 GTF3C1Q12789 2109 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 NAE1Q13564 534 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ABRAXAS2Q15018 415 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 TESK1Q15569 626 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 CYP1B1Q16678 543 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 NDUFA9Q16795 377 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 LONRF1Q17RB8 773 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 TTLL9Q3SXZ7 439 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 HSP90AA5PQ58FG0 334 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 CATSPEREQ5SY80 951 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 THEMIS2Q5TEJ8 643 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 MFSD4BQ5TF39 518 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ARMC3Q5W041 872 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 AGTRAPQ6RW13 159 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 LCTLQ6UWM7 567 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 GALNTL5Q7Z4T8 443 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ASPGQ86U10 573 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 SPPL2CQ8IUH8 684 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 MARVELD2Q8N4S9 558 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 MFSD9Q8NBP5 474 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 C2CD4AQ8NCU7 369 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 NFAM1Q8NET5 270 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 ABHD11Q8NFV4 315 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 OR4K1Q8NGD4 311 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 M1APQ8TC57 530 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 THAP3Q8WTV1 239 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 PYCR2Q96C36 320 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 ZNF354BQ96LW1 612 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 KCNK13Q9HB14 408 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 IARS2Q9NSE4 1012 aaKnown RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 C20orf96Q9NUD7 363 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 ZNF223Q9UK11 482 aaPredicted RBP8.4□□□□□ -1.06
TPM3-201ENST00000271850 NPIPA1Q9UND3 350 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 MEMO1Q9Y316 297 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 SLC22A7Q9Y694 548 aa8.4□□□□□ -1.06
TPM3-201ENST00000271850 IGKV3D-11A0A0A0MRZ8 115 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 MAGEB17A8MXT2 336 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 FAM227AF5H4B4 570 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 EIF3FO00303 357 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 NRDCO43847 1150 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 GALR3O60755 368 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 PAMP19021 973 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 THOC5Q13769 683 aaKnown RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 CRYMQ14894 314 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 MEP1AQ16819 746 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 RNASEH2BQ5TBB1 312 aaKnown RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 CAPN13Q6MZZ7 669 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 UGT3A1Q6NUS8 523 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 RPTNQ6XPR3 784 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 C3P1Q6ZMU1 363 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 CNTN4Q8IWV2 1026 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 CPSF7Q8N684 471 aaKnown RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 ANKRD53Q8N9V6 530 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 OR56A3Q8NH54 315 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 SLC13A3Q8WWT9 602 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 METTL21AQ8WXB1 218 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 LINGO1Q96FE5 620 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 OR1F2PQ96R84 312 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 DMRTA2Q96SC8 542 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 OLFM1Q99784 485 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 EBNA1BP2Q99848 306 aaKnown RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 TREX2Q9BQ50 279 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 KLHL31Q9H511 634 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 CDCP1Q9H5V8 836 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 TRIM45Q9H8W5 580 aaPredicted RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 PARVBQ9HBI1 364 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 ANKHQ9HCJ1 492 aa8.39□□□□□ -1.07
TPM3-201ENST00000271850 UTP6Q9NYH9 597 aaKnown RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 SUCOQ9UBS9 1254 aaKnown RBP8.39□□□□□ -1.07
TPM3-201ENST00000271850 SPG11Q96JI7 2443 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 PFDN6O15212 129 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 NDUFS4O43181 175 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 CHST10O43529 356 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 ASNA1O43681 348 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 PRKNO60260 465 aaPredicted RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 NME2P1O60361 137 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 TBX6O95947 436 aaPredicted RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 AHSGP02765 367 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 UQCRHP07919 91 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 FHP07954 510 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 SP1P08047 785 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms