RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 ASB1Q9Y576 335 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 GOLGA8QA0A0J9YX86 632 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 GOLGA8OA6NCC3 632 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 KLHL33A6NCF5 533 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 GOLGA8NF8WBI6 632 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 ESRRBO95718 433 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 ANXA5P08758 320 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 EPHA3P29320 983 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 PKNOX1P55347 436 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 CDC16Q13042 620 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 C18orf21Q32NC0 220 aaPredicted RBP12.72□□□□□ -0.37
SGCA-201ENST00000262018 FBXO48Q5FWF7 155 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 PWWP2BQ6NUJ5 590 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 UBE2R2Q712K3 238 aaPredicted RBP12.72□□□□□ -0.37
SGCA-201ENST00000262018 ZNF547Q8IVP9 402 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 ESAMQ96AP7 390 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 KLHL29Q96CT2 875 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 SLC7A6OSQ96CW6 309 aaPredicted RBP12.72□□□□□ -0.37
SGCA-201ENST00000262018 EGFL8Q99944 293 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 TMEM79Q9BSE2 394 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 TRIM54Q9BYV2 358 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 CD244Q9BZW8 370 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 LRMDAQ9H2I8 198 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 PARVBQ9HBI1 364 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 AGPAT4Q9NRZ5 378 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 CPNE7Q9UBL6 633 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 FIS1Q9Y3D6 152 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 PRKAB1Q9Y478 270 aa12.72□□□□□ -0.37
SGCA-201ENST00000262018 PCYT1BQ9Y5K3 369 aaPredicted RBP12.72□□□□□ -0.37
SGCA-201ENST00000262018 DNMT3AQ9Y6K1 912 aaPredicted RBP12.72□□□□□ -0.37
SGCA-201ENST00000262018 C17orf113A0A1B0GUU1 675 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 LILRA5A6NI73 299 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 E9PBE3 544 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 LIN7AO14910 233 aaPredicted RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 SLC22A2O15244 555 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 TOX3O15405 576 aaPredicted RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 KIF1CO43896 1103 aaKnown RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 KLHL41O60662 606 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 KCNJ13O60928 360 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 PSIP1O75475 530 aaKnown RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 SKAP2O75563 359 aaPredicted RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 MATN4O95460 622 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 GUCA1CO95843 209 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 ACP5P13686 325 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 SLC2A4P14672 509 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 AMD1P17707 334 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 CYP2A7P20853 494 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 ADSLP30566 484 aaPredicted RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 GGT5P36269 586 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 AP1S2P56377 157 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 GTF2H2Q13888 395 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 RBBP7Q16576 425 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 SYTL3Q4VX76 610 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 CRB2Q5IJ48 1285 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 CACHD1Q5VU97 1274 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 CLEC6AQ6EIG7 209 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 GTF2H2CQ6P1K8 395 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 GOLGA7Q7Z5G4 137 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 C11orf96Q7Z7L8 435 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 SLC22A15Q8IZD6 547 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 ARHGAP24Q8N264 748 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 CPSF7Q8N684 471 aaKnown RBP12.71□□□□□ -0.37
SGCA-201ENST00000262018 CEP70Q8NHQ1 597 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 ADAMTS17Q8TE56 1095 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 MR1Q95460 341 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 PDE7BQ9NP56 450 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 WWOXQ9NZC7 414 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 C5AR2Q9P296 337 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 TAGLN3Q9UI15 199 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 ZNF225Q9UK10 706 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 RARRES3Q9UL19 164 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 KCNK6Q9Y257 313 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 DNAJC15Q9Y5T4 150 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 PKDREJQ9NTG1 2253 aa12.71□□□□□ -0.37
SGCA-201ENST00000262018 POP7O75817 140 aaKnown RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 UBXN7O94888 489 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 UROSP10746 265 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 ESRRAP11474 423 aaPredicted RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 NQO1P15559 274 aaKnown RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 NCF2P19878 526 aaPredicted RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 HIST1H2ADP20671 130 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 PRDX6P30041 224 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 HSPA7P48741 367 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 CLCNKAP51800 687 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 MNAT1P51948 309 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 FOXA1P55317 472 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 DMPKQ09013 629 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 PLA2G4EQ3MJ16 856 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 CYB5D1Q6P9G0 228 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 ZNF517Q6ZMY9 492 aaPredicted RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 GPRIN3Q6ZVF9 776 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 CHSY3Q70JA7 882 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 FJX1Q86VR8 437 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 AMZ2Q86W34 360 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 HOMEZQ8IX15 550 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 MMP21Q8N119 569 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms