RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 ALPK3Q96L96 1907 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 SERTM1A2A2V5 107 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 CA12O43570 354 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 ADRA2AP08913 450 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 SP140Q13342 867 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 ZNF385BQ569K4 471 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 PLEKHS1Q5SXH7 462 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 C10orf62Q5T681 223 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-201ENST00000261693 PNCKQ6P2M8 343 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 TUBA3EQ6PEY2 450 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 DPY19L3Q6ZPD9 716 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 B3GNT7Q8NFL0 401 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 C11orf24Q96F05 449 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-201ENST00000261693 TXNDC15Q96J42 360 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 SAMD11Q96NU1 681 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 CFAP97Q9P2B7 532 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 HELZP42694 1942 aaKnown RBP18.6■□□□□ 0.57
SCARB1-201ENST00000261693 CKMP06732 381 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 PREPP48147 710 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 PTPN5P54829 565 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 HBA1P69905 142 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 DMC1Q14565 340 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 GANABQ14697 944 aaKnown RBP18.6■□□□□ 0.57
SCARB1-201ENST00000261693 LRIT3Q3SXY7 679 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-201ENST00000261693 OR5AK3PQ8NH89 298 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 HUS1BQ8NHY5 278 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 NFKBIDQ8NI38 313 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 COL21A1Q96P44 957 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 OR5M11Q96RB7 305 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 BTNL2Q9UIR0 455 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 IFT52Q9Y366 437 aa18.6■□□□□ 0.57
SCARB1-201ENST00000261693 SAP18O00422 153 aaKnown RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 PCDH17O14917 1159 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 SSX4O60224 188 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 DPM1O60762 260 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 AOC2O75106 756 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 LATS1O95835 1130 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 BDKRB1P46663 353 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 TSTA3Q13630 321 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 MED22Q15528 200 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 MICAQ29983 383 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 AGTRAPQ6RW13 159 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 CMTM8Q8IZV2 173 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 LMNTD1Q8N9Z9 388 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 KBTBD8Q8NFY9 601 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 MYLIPQ8WY64 445 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 KCNS3Q9BQ31 491 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 RHCGQ9UBD6 479 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 OGDHLQ9ULD0 1010 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 UGT2A1Q9Y4X1 527 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 ASNA1O43681 348 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 GABRB1P18505 474 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 DEPDC1Q5TB30 811 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 CCBE1Q6UXH8 406 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 CYP4Z2PQ8N1L4 340 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 CHST14Q8NCH0 376 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 OR4C15Q8NGM1 316 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 CLP1Q92989 425 aaKnown RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 CIDECQ96AQ7 238 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 ECHDC3Q96DC8 303 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 NXF2Q9GZY0 626 aaKnown RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 EHD1Q9H4M9 534 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 C14orf119Q9NWQ9 140 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 EXO1Q9UQ84 846 aaKnown RBP18.59■□□□□ 0.57
SCARB1-201ENST00000261693 POFUT2Q9Y2G5 429 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 MAP4K5Q9Y4K4 846 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 PCDHGA3Q9Y5H0 932 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
SCARB1-201ENST00000261693 SLC16A5O15375 505 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 SLC10A3P09131 477 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 MVDP53602 400 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 RPS13P62277 151 aaKnown RBP18.58■□□□□ 0.57
SCARB1-201ENST00000261693 MC1RQ01726 317 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 ZNF45Q02386 682 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 TEAD4Q15561 434 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 IFI44LQ53G44 452 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 MLIPQ5VWP3 458 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 GDPD3Q7L5L3 318 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 OTOP2Q7RTS6 562 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 CRIPAKQ8N1N5 446 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 CELF2-AS1Q8N7Q2 184 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 OR7G3Q8NG95 312 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 ASZ1Q8WWH4 475 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 ATL1Q8WXF7 558 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 EFHD2Q96C19 240 aaPredicted RBP18.58■□□□□ 0.57
SCARB1-201ENST00000261693 SCLYQ96I15 445 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 IGSF21Q96ID5 467 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 MCCC1Q96RQ3 725 aaPredicted RBP18.58■□□□□ 0.57
SCARB1-201ENST00000261693 YIPF2Q9BWQ6 316 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 CEP44Q9C0F1 390 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 SMG9Q9H0W8 520 aaKnown RBP18.58■□□□□ 0.57
SCARB1-201ENST00000261693 TRIM39Q9HCM9 518 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 CORO2BQ9UQ03 480 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 PCDHGB6Q9Y5F9 930 aa18.58■□□□□ 0.57
SCARB1-201ENST00000261693 CFAP20Q9Y6A4 193 aaKnown RBP18.58■□□□□ 0.57
SCARB1-201ENST00000261693 HAT1O14929 419 aa18.58■□□□□ 0.56
SCARB1-201ENST00000261693 KIAA0513O60268 411 aa18.58■□□□□ 0.56
SCARB1-201ENST00000261693 C6orf47O95873 294 aa18.58■□□□□ 0.56
SCARB1-201ENST00000261693 UGT2B15P54855 530 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms