RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SLC29A3Q9BZD2 475 aa22.46■■□□□ 1.19
HOMER3-201ENST00000221222 LHX9Q9NQ69 397 aa22.46■■□□□ 1.19
HOMER3-201ENST00000221222 PADI1Q9ULC6 663 aa22.46■■□□□ 1.19
HOMER3-201ENST00000221222 MRPS2Q9Y399 296 aaKnown RBP22.46■■□□□ 1.19
HOMER3-201ENST00000221222 LOC400499M0QZD8 3231 aa22.45■■□□□ 1.19
HOMER3-201ENST00000221222 WDR91A4D1P6 747 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 LRIT2A6NDA9 550 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 URADA6NGE7 173 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 ONECUT2O95948 504 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 CCNYL3P0C7X3 344 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 ALAS2P22557 587 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 EIF2S3P41091 472 aaKnown RBP22.45■■□□□ 1.18
HOMER3-201ENST00000221222 STXBP1P61764 594 aaKnown RBP22.45■■□□□ 1.18
HOMER3-201ENST00000221222 SNRPNP63162 240 aaKnown RBP22.45■■□□□ 1.18
HOMER3-201ENST00000221222 ABHD18Q0P651 414 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 RCN2Q14257 317 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 LRRC69Q6ZNQ3 347 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 CACNA2D3Q8IZS8 1091 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 MS4A8Q9BY19 250 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 AICDAQ9GZX7 198 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 DMRT3Q9NQL9 472 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 PSD3Q9NYI0 1048 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 PPT2Q9UMR5 302 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 SNX6Q9UNH7 406 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 PTPRQQ9UMZ3 2332 aa22.45■■□□□ 1.18
HOMER3-201ENST00000221222 FOXE1O00358 373 aaPredicted RBP22.44■■□□□ 1.18
HOMER3-201ENST00000221222 FFAR3O14843 346 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 GPR42O15529 346 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 FOXS1O43638 330 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 SERPINE1P05121 402 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 CAPN1P07384 714 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 ITGAXP20702 1163 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 HNRNPH1P31943 449 aaKnown RBP22.44■■□□□ 1.18
HOMER3-201ENST00000221222 ATP1A2P50993 1020 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 PHEXP78562 749 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 DCDP81605 110 aaKnown RBP22.44■■□□□ 1.18
HOMER3-201ENST00000221222 CLN3Q13286 438 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 C1orf189Q5VU69 101 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 ABHD13Q7L211 337 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 CDYL2Q8N8U2 506 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 MGARPQ8TDB4 240 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 UTP15Q8TED0 518 aaKnown RBP22.44■■□□□ 1.18
HOMER3-201ENST00000221222 CCT6BQ92526 530 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 GAL3ST3Q96A11 431 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 PAIP2Q9BPZ3 127 aaKnown RBP22.44■■□□□ 1.18
HOMER3-201ENST00000221222 AKIRIN1Q9H9L7 192 aaPredicted RBP22.44■■□□□ 1.18
HOMER3-201ENST00000221222 NDOR1Q9UHB4 597 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 CDC14AQ9UNH5 594 aa22.44■■□□□ 1.18
HOMER3-201ENST00000221222 SMIM10L1P0DMW3 83 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 ALOX12P18054 663 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 AGXTP21549 392 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 STAT5AP42229 794 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 PPP2R2AP63151 447 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 IFT88Q13099 833 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 DDX39BQ13838 428 aaKnown RBP22.43■■□□□ 1.18
HOMER3-201ENST00000221222 HERC3Q15034 1050 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 CHI3L2Q15782 390 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 ARL13AQ5H913 290 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-201ENST00000221222 TOR1AIP1Q5JTV8 583 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 TTC19Q6DKK2 380 aaPredicted RBP22.43■■□□□ 1.18
HOMER3-201ENST00000221222 DTWD1Q8N5C7 304 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 PPP1R14CQ8TAE6 165 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 ZCCHC10Q8TBK6 192 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 METTL6Q8TCB7 284 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 KCNE4Q8WWG9 221 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 MR1Q95460 341 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 MS4A6EQ96DS6 147 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 CMTM7Q96FZ5 175 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 SMIM10Q96HG1 83 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 MTERF1Q99551 399 aaKnown RBP22.43■■□□□ 1.18
HOMER3-201ENST00000221222 KLHL31Q9H511 634 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 ELOVL6Q9H5J4 265 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 MED4Q9NPJ6 270 aa22.43■■□□□ 1.18
HOMER3-201ENST00000221222 MAGEB17A8MXT2 336 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 TMEM114B3SHH9 223 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 RRP8O43159 456 aaKnown RBP22.42■■□□□ 1.18
HOMER3-201ENST00000221222 NSA2O95478 260 aaKnown RBP22.42■■□□□ 1.18
HOMER3-201ENST00000221222 KRT6AP02538 564 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 KRT6BP04259 564 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 CHRNGP07510 517 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 GRK2P25098 689 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 ARRB2P32121 409 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 KRT6CP48668 564 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 TGIF1Q15583 401 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 NKAIN1Q4KMZ8 207 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 TMEM35AQ53FP2 167 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 CES4AQ5XG92 561 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 NIPAL1Q6NVV3 410 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 CUZD1Q86UP6 607 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 DPH1Q9BZG8 443 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 FAM117AQ9C073 453 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 REXO4Q9GZR2 422 aaKnown RBP22.42■■□□□ 1.18
HOMER3-201ENST00000221222 CHST8Q9H2A9 424 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 EML4Q9HC35 981 aaKnown RBP22.42■■□□□ 1.18
HOMER3-201ENST00000221222 ANKHQ9HCJ1 492 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 TNFRSF12AQ9NP84 129 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 SCN3AQ9NY46 2000 aa22.42■■□□□ 1.18
HOMER3-201ENST00000221222 A0A0A6YYC8 382 aaPredicted RBP22.41■■□□□ 1.18
HOMER3-201ENST00000221222 C4orf51C9J302 202 aa22.41■■□□□ 1.18
HOMER3-201ENST00000221222 H0YIG0 161 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms