RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZNF33BQ06732 778 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 SELENBP1Q13228 472 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 CCSMST1Q4G0I0 132 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 COX20Q5RI15 118 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ANXA8L1Q5VT79 327 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 GRHL2Q6ISB3 625 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ZNF852Q6ZMS4 543 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 DPY19L3Q6ZPD9 716 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 GAREM2Q75VX8 874 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 POC5Q8NA72 575 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 UTP15Q8TED0 518 aaKnown RBP16.61■□□□□ 0.25
USB1-201ENST00000219281 CLP1Q92989 425 aaKnown RBP16.61■□□□□ 0.25
USB1-201ENST00000219281 NIPSNAP1Q9BPW8 284 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 OR51E2Q9H255 320 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 FKBP14Q9NWM8 211 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 GNG14A0A1W2PPG7 69 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 MGAT4DA6NG13 374 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 M0R129 80 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 KPNA5O15131 536 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 RPLP0P05388 317 aaKnown RBP16.61■□□□□ 0.25
USB1-201ENST00000219281 CKMP06732 381 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ACRP10323 421 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ETFAP13804 333 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 LAG3P18627 525 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ASMTP46597 345 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 CDH12P55289 794 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ZNF181Q2M3W8 571 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 TPRG1LQ5T0D9 272 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 MLIPQ5VWP3 458 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 AGTRAPQ6RW13 159 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ZNF605Q86T29 641 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 STX19Q8N4C7 294 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ASZ1Q8WWH4 475 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
USB1-201ENST00000219281 OR4K3Q96R72 315 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 CEP44Q9C0F1 390 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 CPNE5Q9HCH3 593 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
USB1-201ENST00000219281 PCDHGA2Q9Y5H1 932 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 H0YIV9 168 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 SGTAO43765 313 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 TLL1O43897 1013 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 MAGP20916 626 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 GTF2E2P29084 291 aaKnown RBP16.6■□□□□ 0.25
USB1-201ENST00000219281 CRISP3P54108 245 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 CYP4F2P78329 520 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 KCNC3Q14003 757 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 TEAD4Q15561 434 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 KCNJ8Q15842 424 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 LRRC26Q2I0M4 334 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 EXOC3L2Q2M3D2 409 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 CYP27C1Q4G0S4 372 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 ZDHHC20Q5W0Z9 365 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 TMEM53Q6P2H8 277 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 TUBA3EQ6PEY2 450 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 CMTM8Q8IZV2 173 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 AMER2Q8N7J2 671 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 CHST14Q8NCH0 376 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 MIR1-1HGQ9H1L0 117 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 GPATCH2Q9NW75 528 aa16.6■□□□□ 0.25
USB1-201ENST00000219281 DLGAP3O95886 979 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 PTHP01270 115 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 GSTM1P09488 218 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 ADORA3P0DMS8 318 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 PABPC1P11940 636 aaKnown RBP16.59■□□□□ 0.25
USB1-201ENST00000219281 HNF4AP41235 474 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 FOXD4Q12950 439 aaPredicted RBP16.59■□□□□ 0.25
USB1-201ENST00000219281 ZNF385BQ569K4 471 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 LGI4Q8N135 537 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 OR4K1Q8NGD4 311 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 OR4C15Q8NGM1 316 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 CHTF18Q8WVB6 975 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 COQ8BQ96D53 544 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 CDADC1Q9BWV3 514 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 BRF2Q9HAW0 419 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 STOX2Q9P2F5 926 aaPredicted RBP16.59■□□□□ 0.25
USB1-201ENST00000219281 ZNF282Q9UDV7 671 aaPredicted RBP16.59■□□□□ 0.25
USB1-201ENST00000219281 SAGE2PA6NJ88 616 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 TGM5O43548 720 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 HSMCR30P0CW71 290 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 ANXA8P13928 327 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 SPNP16150 400 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 GABRR2P28476 465 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 BDKRB1P46663 353 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 PXNP49023 591 aaPredicted RBP16.59■□□□□ 0.25
USB1-201ENST00000219281 ST3GAL4Q11206 333 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 MICAQ29983 383 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 IFI44LQ53G44 452 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 ARMCX4Q5H9R4 360 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 MPP7Q5T2T1 576 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 HTR3DQ70Z44 454 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 SYTL1Q8IYJ3 562 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 PARP16Q8N5Y8 322 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 HUS1BQ8NHY5 278 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 COL21A1Q96P44 957 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 POFUT2Q9Y2G5 429 aa16.59■□□□□ 0.25
USB1-201ENST00000219281 PRAMEF25A6NGN4 478 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 J3KTA2 159 aa16.58■□□□□ 0.25
USB1-201ENST00000219281 SLCO2B1O94956 709 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms