RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 IFI35P80217 286 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 TCTE1Q5JU00 501 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 DRICH1Q6PGQ1 229 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 RAD9BQ6WBX8 426 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TMEM41AQ96HV5 264 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 DUSP16Q9BY84 665 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF442Q9H7R0 627 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SRA1Q9HD15 236 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 EDNRAP25101 427 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 BMP8BP34820 402 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RIPPLY1Q0D2K3 151 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RAB12Q6IQ22 244 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RHBDF2Q6PJF5 856 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 IL20RBQ6UXL0 311 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 BMP8AQ7Z5Y6 402 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 IRGQQ8WZA9 623 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 UBL7Q96S82 380 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 CDCA3Q99618 268 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 ADAM33Q9BZ11 813 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ELAC1Q9H777 363 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 HS3ST4Q9Y661 456 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 OR5K3A6NET4 321 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SAGE2PA6NJ88 616 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SLC1A7O00341 560 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 UGDHO60701 494 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 MT-CYBP00156 380 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 FABP3P05413 133 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 MAGEA6P43360 314 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CCR10P46092 362 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 PSMA6P60900 246 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 DCAF12Q5T6F0 453 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TPRG1Q6ZUI0 275 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NLRP8Q86W28 1048 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZNF473Q8WTR7 871 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 NMD3Q96D46 503 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 CMTM7Q96FZ5 175 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 GAL3ST1Q99999 423 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TMEM181Q9P2C4 612 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ASTN2O75129 1339 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 IRAK2O43187 625 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 AREGP15514 252 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CXCL12P48061 93 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 CAMKMTQ7Z624 323 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TUSC5Q8IXB3 177 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NLGN2Q8NFZ4 835 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 OR14K1Q8NGZ2 314 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 MRPL57Q9BQC6 102 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 PLK2Q9NYY3 685 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 BOLA2-SMG1P6H3BVE0 249 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NME6O75414 186 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 DEFA4P12838 97 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TBPP20226 339 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ASPAP45381 313 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RABIFP47224 123 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 AKR1C2P52895 323 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 HTD2P86397 168 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SCGB2B2Q4G0G5 96 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 C11orf63Q6NUN7 778 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 DCDC5Q6ZRR9 648 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RBMXL3Q8N7X1 1067 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 LPIN3Q9BQK8 851 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZNF286AQ9HBT8 521 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 FBXO6Q9NRD1 293 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 MADDQ8WXG6 1647 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NUDT19A8MXV4 375 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 POLR1CO15160 346 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 SLC2A5P22732 501 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 MAGEA3P43357 314 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LIPMQ5VYY2 423 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LINGO2Q7L985 606 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 DEFB107AQ8IZN7 70 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 HLA-CQ95604 372 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 IL25Q9H293 177 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SMCO4Q9NRQ5 59 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NUDT4Q9NZJ9 180 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 LRIT1Q9P2V4 623 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SARDHQ9UL12 918 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NDUFV2P19404 249 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 GCSHP23434 173 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 HRH2P25021 359 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 EIF2B1Q14232 305 aaKnown RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 GINS1Q14691 196 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ARSIQ5FYB1 569 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TMEM69Q5SWH9 247 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZBED3Q96IU2 234 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 PAFAH2Q99487 392 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZNF221Q9UK13 617 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZNF850A8MQ14 1090 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 GSG1L2A8MUP6 293 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SEC14L5O43304 696 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 RNF13O43567 381 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 SEC24AO95486 1093 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ZNF8P17098 575 aaPredicted RBP3.34□□□□□ -1.87
NEB-201ENST00000172853 TXNDC8Q6A555 127 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 PLET1Q6UQ28 207 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 FAM109AQ8N4B1 249 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 TGM7Q96PF1 710 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 XPNPEP1Q9NQW7 623 aa3.34□□□□□ -1.87
NEB-201ENST00000172853 ITM2CQ9NQX7 267 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms