RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
CASC19-230ENST00000641421 TBC1D9Q6ZT07 1266 aa13.2□□□□□ -0.3
CASC19-230ENST00000641421 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
CASC19-230ENST00000641421 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
CASC19-230ENST00000641421 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
CASC19-230ENST00000641421 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
CASC19-230ENST00000641421 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
CASC19-230ENST00000641421 NBR1Q14596 966 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
CASC19-230ENST00000641421 CARD10Q9BWT7 1032 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
CASC19-230ENST00000641421 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
CASC19-230ENST00000641421 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
CASC19-230ENST00000641421 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
CASC19-230ENST00000641421 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
CASC19-230ENST00000641421 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
CASC19-230ENST00000641421 IL2RBP14784 551 aa13.18□□□□□ -0.3
CASC19-230ENST00000641421 EVA1CP58658 441 aa13.18□□□□□ -0.3
CASC19-230ENST00000641421 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
CASC19-230ENST00000641421 RBM25P49756 843 aaKnown RBP13.17□□□□□ -0.3
CASC19-230ENST00000641421 POLA2Q14181 598 aa13.17□□□□□ -0.3
CASC19-230ENST00000641421 PDIA6Q15084 440 aa13.17□□□□□ -0.3
CASC19-230ENST00000641421 PPP1R42Q7Z4L9 355 aa13.17□□□□□ -0.3
CASC19-230ENST00000641421 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
CASC19-230ENST00000641421 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
CASC19-230ENST00000641421 C5P01031 1676 aa13.16□□□□□ -0.3
CASC19-230ENST00000641421 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
CASC19-230ENST00000641421 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
CASC19-230ENST00000641421 PDE1AP54750 535 aa13.16□□□□□ -0.3
CASC19-230ENST00000641421 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
CASC19-230ENST00000641421 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
CASC19-230ENST00000641421 OSBPL3Q9H4L5 887 aa13.16□□□□□ -0.3
CASC19-230ENST00000641421 ERVV-2B6SEH9 535 aa13.15□□□□□ -0.3
CASC19-230ENST00000641421 LINS1Q8NG48 757 aa13.15□□□□□ -0.3
CASC19-230ENST00000641421 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
CASC19-230ENST00000641421 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
CASC19-230ENST00000641421 SDSP20132 328 aa13.14□□□□□ -0.31
CASC19-230ENST00000641421 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
CASC19-230ENST00000641421 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
CASC19-230ENST00000641421 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
CASC19-230ENST00000641421 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
CASC19-230ENST00000641421 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
CASC19-230ENST00000641421 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
CASC19-230ENST00000641421 MYL6BP14649 208 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 MX1P20591 662 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 MTX1Q13505 466 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
CASC19-230ENST00000641421 HSP90AB4PQ58FF6 505 aa13.13□□□□□ -0.31
CASC19-230ENST00000641421 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
CASC19-230ENST00000641421 GRM8O00222 908 aa13.12□□□□□ -0.31
CASC19-230ENST00000641421 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
CASC19-230ENST00000641421 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
CASC19-230ENST00000641421 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
CASC19-230ENST00000641421 UTYO14607 1347 aa13.11□□□□□ -0.31
CASC19-230ENST00000641421 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
CASC19-230ENST00000641421 KIF1BPQ96EK5 621 aa13.11□□□□□ -0.31
CASC19-230ENST00000641421 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
CASC19-230ENST00000641421 AOX1Q06278 1338 aa13.11□□□□□ -0.31
CASC19-230ENST00000641421 ROBO1Q9Y6N7 1651 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 LRP10Q7Z4F1 713 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 BTG4Q9NY30 223 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
CASC19-230ENST00000641421 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
CASC19-230ENST00000641421 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 SNX21Q969T3 373 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 MYD88Q99836 296 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 GLI3P10071 1580 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
CASC19-230ENST00000641421 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
CASC19-230ENST00000641421 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.31
CASC19-230ENST00000641421 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.31
CASC19-230ENST00000641421 OS9Q13438 667 aaPredicted RBP13.08□□□□□ -0.31
CASC19-230ENST00000641421 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.31
CASC19-230ENST00000641421 GCKRQ14397 625 aa13.08□□□□□ -0.32
CASC19-230ENST00000641421 NUTM1Q86Y26 1132 aa13.08□□□□□ -0.32
CASC19-230ENST00000641421 KIF2CQ99661 725 aa13.08□□□□□ -0.32
CASC19-230ENST00000641421 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
CASC19-230ENST00000641421 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.32
CASC19-230ENST00000641421 PAPPAQ13219 1627 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 ERC2O15083 957 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 REC8O95072 547 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 ERC1Q8IUD2 1116 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms