RNA–Protein interactions for RNA: ENST00000640752.1

HADH-223, Transcript of hydroxyacyl-CoA dehydrogenase, human

TSL 5

Gene HADH, Length 5,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HADH-223	ENST00000640752	IFNL2	Q8IZJ0	200 aa		14.21	□□□□□ -0.14
HADH-223	ENST00000640752	ST5	P78524	1137 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	VPS36	Q86VN1	386 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	DNAAF4	Q8WXU2	420 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	MSH6	P52701	1360 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	GOLGA6L7	A0A1B0GV03	622 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	BAG4	O95429	457 aa	Known RBP	14.2	□□□□□ -0.14
HADH-223	ENST00000640752	TNR	Q92752	1358 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	MYO1B	O43795	1136 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	TOM1	O60784	492 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	TTLL12	Q14166	644 aa	Predicted RBP	14.2	□□□□□ -0.14
HADH-223	ENST00000640752	SH2B1	Q9NRF2	756 aa	Predicted RBP	14.2	□□□□□ -0.14
HADH-223	ENST00000640752	PTPRC	P08575	1304 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	STXBP4	Q6ZWJ1	553 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	CABP5	Q9NP86	173 aa		14.2	□□□□□ -0.14
HADH-223	ENST00000640752	HLA-DOA	P06340	250 aa		14.19	□□□□□ -0.14
HADH-223	ENST00000640752	NOS1	P29475	1434 aa		14.19	□□□□□ -0.14
HADH-223	ENST00000640752	PIBF1	Q8WXW3	757 aa		14.19	□□□□□ -0.14
HADH-223	ENST00000640752	SMARCC1	Q92922	1105 aa	Predicted RBP	14.19	□□□□□ -0.14
HADH-223	ENST00000640752	TTC21A	Q8NDW8	1320 aa		14.19	□□□□□ -0.14
HADH-223	ENST00000640752	MINDY4B	A8MYZ0	360 aa		14.19	□□□□□ -0.14
HADH-223	ENST00000640752	DDX46	Q7L014	1031 aa	Known RBP	14.19	□□□□□ -0.14
HADH-223	ENST00000640752	EIF3J	O75822	258 aa	Known RBP	14.18	□□□□□ -0.14
HADH-223	ENST00000640752	LRRC27	Q9C0I9	530 aa		14.18	□□□□□ -0.14
HADH-223	ENST00000640752	DHX29	Q7Z478	1369 aa	Known RBP	14.18	□□□□□ -0.14
HADH-223	ENST00000640752	KIF5B	P33176	963 aa		14.18	□□□□□ -0.14
HADH-223	ENST00000640752	CAST	P20810	708 aa	Known RBP	14.18	□□□□□ -0.14
HADH-223	ENST00000640752	FKBP15	Q5T1M5	1219 aa		14.18	□□□□□ -0.14
HADH-223	ENST00000640752	TMEM87A	Q8NBN3	555 aa		14.18	□□□□□ -0.14
HADH-223	ENST00000640752	ZGPAT	Q8N5A5	531 aa	Known RBP	14.17	□□□□□ -0.14
HADH-223	ENST00000640752	EIF5	P55010	431 aa	Known RBP	14.17	□□□□□ -0.14
HADH-223	ENST00000640752	SCAF11	Q99590	1463 aa	Known RBP	14.17	□□□□□ -0.14
HADH-223	ENST00000640752		H0YHG0	523 aa		14.17	□□□□□ -0.14
HADH-223	ENST00000640752	CCDC96	Q2M329	555 aa		14.17	□□□□□ -0.14
HADH-223	ENST00000640752	NUP62CL	Q9H1M0	184 aa		14.17	□□□□□ -0.14
HADH-223	ENST00000640752	SEPT11	Q9NVA2	429 aa	Known RBP	14.17	□□□□□ -0.14
HADH-223	ENST00000640752	CETN1	Q12798	172 aa		14.17	□□□□□ -0.14
HADH-223	ENST00000640752	BOLA2	Q9H3K6	86 aa		14.17	□□□□□ -0.14
HADH-223	ENST00000640752	UQCRFS1P1	P0C7P4	283 aa		14.16	□□□□□ -0.14
HADH-223	ENST00000640752	C14orf93	Q9H972	538 aa	Known RBP	14.16	□□□□□ -0.14
HADH-223	ENST00000640752	CATIP	Q7Z7H3	387 aa		14.16	□□□□□ -0.14
HADH-223	ENST00000640752	UPF3B	Q9BZI7	483 aa	Known RBP	14.16	□□□□□ -0.14
HADH-223	ENST00000640752	HDAC9	Q9UKV0	1011 aa		14.16	□□□□□ -0.14
HADH-223	ENST00000640752	ANKRD24	Q8TF21	1146 aa		14.16	□□□□□ -0.14
HADH-223	ENST00000640752	C6orf229	H3BNL8	230 aa		14.16	□□□□□ -0.14
HADH-223	ENST00000640752	BCL11B	Q9C0K0	894 aa	Predicted RBP	14.16	□□□□□ -0.14
HADH-223	ENST00000640752	KIF2A	O00139	706 aa	Predicted RBP	14.15	□□□□□ -0.14
HADH-223	ENST00000640752	PDE4B	Q07343	736 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	AXDND1	Q5T1B0	1012 aa	Predicted RBP	14.15	□□□□□ -0.14
HADH-223	ENST00000640752	SSH1	Q8WYL5	1049 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	ZBTB3	Q9H5J0	574 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	EPB41L2	O43491	1005 aa	Known RBP	14.15	□□□□□ -0.14
HADH-223	ENST00000640752	GPT	P24298	496 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	AMPD3	Q01432	767 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	DNAJC5B	Q9UF47	199 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752		B4DLN1	442 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	MRPL12	P52815	198 aa	Known RBP	14.15	□□□□□ -0.14
HADH-223	ENST00000640752	LEKR1	Q6ZMV7	388 aa		14.15	□□□□□ -0.14
HADH-223	ENST00000640752	CWC25	Q9NXE8	425 aa	Predicted RBP	14.14	□□□□□ -0.15
HADH-223	ENST00000640752	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.14	□□□□□ -0.15
HADH-223	ENST00000640752	SLC12A7	Q9Y666	1083 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	ZNF213	O14771	459 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	RFC4	P35249	363 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	PRPF40B	Q6NWY9	871 aa	Known RBP	14.14	□□□□□ -0.15
HADH-223	ENST00000640752	SCAND2P	Q9GZW5	306 aa	Predicted RBP	14.14	□□□□□ -0.15
HADH-223	ENST00000640752	ACE	P12821	1306 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC194	A0A1B0GVG4	234 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC148	Q8NFR7	591 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	WDR97	A6NE52	1622 aa		14.14	□□□□□ -0.15
HADH-223	ENST00000640752	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.13	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC112	Q8NEF3	446 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	DDX11	Q96FC9	970 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	FEZ1	Q99689	392 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	LRRFIP2	Q9Y608	721 aa	Known RBP	14.13	□□□□□ -0.15
HADH-223	ENST00000640752	NPHP3	Q7Z494	1330 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	CTAGE5	O15320	804 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	RANBP6	O60518	1105 aa	Known RBP	14.13	□□□□□ -0.15
HADH-223	ENST00000640752	RARS	P54136	660 aa	Known RBP	14.13	□□□□□ -0.15
HADH-223	ENST00000640752	SSRP1	Q08945	709 aa	Known RBP	14.13	□□□□□ -0.15
HADH-223	ENST00000640752	SPA17	Q15506	151 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	GBP3	Q9H0R5	595 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	ANKRD62	A6NC57	917 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	FLII	Q13045	1269 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC91	Q7Z6B0	441 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	KIAA1328	Q86T90	577 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	PIK3R4	Q99570	1358 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752		F6X3S4	739 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC152	Q4G0S7	254 aa		14.13	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC66	A2RUB6	948 aa		14.12	□□□□□ -0.15
HADH-223	ENST00000640752	SMARCA5	O60264	1052 aa	Predicted RBP	14.12	□□□□□ -0.15
HADH-223	ENST00000640752	SPC24	Q8NBT2	197 aa		14.12	□□□□□ -0.15
HADH-223	ENST00000640752	CCDC8	Q9H0W5	538 aa	Predicted RBP	14.12	□□□□□ -0.15
HADH-223	ENST00000640752	SNRPA1	P09661	255 aa	Known RBP	14.12	□□□□□ -0.15
HADH-223	ENST00000640752	MAP3K2	Q9Y2U5	619 aa		14.12	□□□□□ -0.15
HADH-223	ENST00000640752	EVI5L	Q96CN4	794 aa		14.12	□□□□□ -0.15
HADH-223	ENST00000640752	NKTR	P30414	1462 aa	Known RBP	14.12	□□□□□ -0.15
HADH-223	ENST00000640752	ANKRD36B	Q8N2N9	1353 aa		14.12	□□□□□ -0.15
HADH-223	ENST00000640752	ENOX2	Q16206	610 aa	Known RBP	14.11	□□□□□ -0.15
HADH-223	ENST00000640752	BACH2	Q9BYV9	841 aa		14.11	□□□□□ -0.15
HADH-223	ENST00000640752	MAP3K1	Q13233	1512 aa		14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms