RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 HDAC1Q13547 482 aaPredicted RBP16.58■□□□□ 0.24
SCN8A-215ENST00000638820 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
SCN8A-215ENST00000638820 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
SCN8A-215ENST00000638820 STARD3NLO95772 234 aa16.57■□□□□ 0.24
SCN8A-215ENST00000638820 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
SCN8A-215ENST00000638820 SPATA31A1Q5TZJ5 1347 aa16.57■□□□□ 0.24
SCN8A-215ENST00000638820 A1BGP04217 495 aa16.57■□□□□ 0.24
SCN8A-215ENST00000638820 ANP32AP39687 249 aaKnown RBP16.57■□□□□ 0.24
SCN8A-215ENST00000638820 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
SCN8A-215ENST00000638820 PIGBQ92521 554 aa16.57■□□□□ 0.24
SCN8A-215ENST00000638820 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
SCN8A-215ENST00000638820 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
SCN8A-215ENST00000638820 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
SCN8A-215ENST00000638820 MYD88Q99836 296 aa16.56■□□□□ 0.24
SCN8A-215ENST00000638820 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
SCN8A-215ENST00000638820 COL18A1P39060 1754 aa16.56■□□□□ 0.24
SCN8A-215ENST00000638820 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
SCN8A-215ENST00000638820 THRAP3Q9Y2W1 955 aaKnown RBP16.56■□□□□ 0.24
SCN8A-215ENST00000638820 ABCC6O95255 1503 aa16.56■□□□□ 0.24
SCN8A-215ENST00000638820 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
SCN8A-215ENST00000638820 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
SCN8A-215ENST00000638820 ATP5J2-PTCD1G3V325 749 aa16.54■□□□□ 0.24
SCN8A-215ENST00000638820 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
SCN8A-215ENST00000638820 LMO7Q8WWI1 1683 aa16.54■□□□□ 0.24
SCN8A-215ENST00000638820 NKX1-1Q15270 411 aaPredicted RBP16.54■□□□□ 0.24
SCN8A-215ENST00000638820 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
SCN8A-215ENST00000638820 CHD1LQ86WJ1 897 aa16.53■□□□□ 0.24
SCN8A-215ENST00000638820 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
SCN8A-215ENST00000638820 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
SCN8A-215ENST00000638820 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
SCN8A-215ENST00000638820 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
SCN8A-215ENST00000638820 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
SCN8A-215ENST00000638820 SPATA31A6Q5VVP1 1343 aa16.53■□□□□ 0.24
SCN8A-215ENST00000638820 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
SCN8A-215ENST00000638820 FAM161AQ3B820 660 aa16.52■□□□□ 0.24
SCN8A-215ENST00000638820 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
SCN8A-215ENST00000638820 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
SCN8A-215ENST00000638820 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
SCN8A-215ENST00000638820 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
SCN8A-215ENST00000638820 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.24
SCN8A-215ENST00000638820 SURF6O75683 361 aaKnown RBP16.52■□□□□ 0.23
SCN8A-215ENST00000638820 SMC5Q8IY18 1101 aa16.52■□□□□ 0.23
SCN8A-215ENST00000638820 USP44Q9H0E7 712 aa16.52■□□□□ 0.23
SCN8A-215ENST00000638820 LINS1Q8NG48 757 aa16.51■□□□□ 0.23
SCN8A-215ENST00000638820 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
SCN8A-215ENST00000638820 FAM208AQ9UK61 1670 aaKnown RBP16.51■□□□□ 0.23
SCN8A-215ENST00000638820 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
SCN8A-215ENST00000638820 KIF6Q6ZMV9 814 aa16.51■□□□□ 0.23
SCN8A-215ENST00000638820 AFF2P51816 1311 aa16.5■□□□□ 0.23
SCN8A-215ENST00000638820 BEND3Q5T5X7 828 aa16.5■□□□□ 0.23
SCN8A-215ENST00000638820 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
SCN8A-215ENST00000638820 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
SCN8A-215ENST00000638820 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
SCN8A-215ENST00000638820 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
SCN8A-215ENST00000638820 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
SCN8A-215ENST00000638820 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
SCN8A-215ENST00000638820 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
SCN8A-215ENST00000638820 VPS72Q15906 364 aa16.49■□□□□ 0.23
SCN8A-215ENST00000638820 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
SCN8A-215ENST00000638820 GRM8O00222 908 aa16.48■□□□□ 0.23
SCN8A-215ENST00000638820 A0A087WZG4 1122 aa16.48■□□□□ 0.23
SCN8A-215ENST00000638820 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
SCN8A-215ENST00000638820 BACH2Q9BYV9 841 aa16.48■□□□□ 0.23
SCN8A-215ENST00000638820 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
SCN8A-215ENST00000638820 UBE3BQ7Z3V4 1068 aa16.47■□□□□ 0.23
SCN8A-215ENST00000638820 COL16A1Q07092 1604 aaPredicted RBP16.47■□□□□ 0.23
SCN8A-215ENST00000638820 NUCB1Q02818 461 aa16.47■□□□□ 0.23
SCN8A-215ENST00000638820 CRYBG1Q9Y4K1 1723 aa16.47■□□□□ 0.23
SCN8A-215ENST00000638820 RGS12O14924 1447 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 PDIA6Q15084 440 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 DCTPP1Q9H773 170 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 QTRT2Q9H974 415 aaKnown RBP16.46■□□□□ 0.23
SCN8A-215ENST00000638820 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 KCNQ2O43526 872 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
SCN8A-215ENST00000638820 METTL22Q9BUU2 404 aaPredicted RBP16.46■□□□□ 0.23
SCN8A-215ENST00000638820 TRPC5Q9UL62 973 aaPredicted RBP16.46■□□□□ 0.23
SCN8A-215ENST00000638820 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.22
SCN8A-215ENST00000638820 ADCY9O60503 1353 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 GPTP24298 496 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 NBPF14Q5TI25 921 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
SCN8A-215ENST00000638820 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
SCN8A-215ENST00000638820 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
SCN8A-215ENST00000638820 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
SCN8A-215ENST00000638820 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
SCN8A-215ENST00000638820 SIL1Q9H173 461 aa16.44■□□□□ 0.22
SCN8A-215ENST00000638820 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
SCN8A-215ENST00000638820 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
SCN8A-215ENST00000638820 SMARCC1Q92922 1105 aaPredicted RBP16.44■□□□□ 0.22
SCN8A-215ENST00000638820 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
SCN8A-215ENST00000638820 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCN8A-215ENST00000638820 LOC102724428A0A0B4J2F2 783 aa16.43■□□□□ 0.22
SCN8A-215ENST00000638820 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms