RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.17
CLN5-206ENST00000635915 GSPT1P15170 499 aaKnown RBP22.32■■□□□ 1.16
CLN5-206ENST00000635915 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
CLN5-206ENST00000635915 DDX54Q8TDD1 881 aaKnown RBP22.32■■□□□ 1.16
CLN5-206ENST00000635915 HSP90AB1P08238 724 aaKnown RBP22.32■■□□□ 1.16
CLN5-206ENST00000635915 MYL6BP14649 208 aa22.32■■□□□ 1.16
CLN5-206ENST00000635915 IL2RBP14784 551 aa22.32■■□□□ 1.16
CLN5-206ENST00000635915 ATP8B2P98198 1209 aa22.32■■□□□ 1.16
CLN5-206ENST00000635915 TTC5Q8N0Z6 440 aa22.32■■□□□ 1.16
CLN5-206ENST00000635915 MRC1P22897 1456 aa22.32■■□□□ 1.16
CLN5-206ENST00000635915 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
CLN5-206ENST00000635915 PCDH11XQ9BZA7 1347 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 PCDH11YQ9BZA8 1340 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 BTG4Q9NY30 223 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 USP16Q9Y5T5 823 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 ROBO1Q9Y6N7 1651 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
CLN5-206ENST00000635915 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
CLN5-206ENST00000635915 CWF19L2Q2TBE0 894 aaKnown RBP22.29■■□□□ 1.16
CLN5-206ENST00000635915 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
CLN5-206ENST00000635915 DAXXQ9UER7 740 aaPredicted RBP22.29■■□□□ 1.16
CLN5-206ENST00000635915 C22orf23Q9BZE7 217 aa22.27■■□□□ 1.16
CLN5-206ENST00000635915 SNRPA1P09661 255 aaKnown RBP22.27■■□□□ 1.16
CLN5-206ENST00000635915 TTC22Q5TAA0 569 aa22.27■■□□□ 1.16
CLN5-206ENST00000635915 TBC1D9Q6ZT07 1266 aa22.27■■□□□ 1.16
CLN5-206ENST00000635915 PPP1R42Q7Z4L9 355 aa22.27■■□□□ 1.16
CLN5-206ENST00000635915 FMNL2Q96PY5 1086 aa22.27■■□□□ 1.16
CLN5-206ENST00000635915 NBR1Q14596 966 aa22.26■■□□□ 1.15
CLN5-206ENST00000635915 XAGE3Q8WTP9 111 aa22.25■■□□□ 1.15
CLN5-206ENST00000635915 TSHZ3Q63HK5 1081 aa22.25■■□□□ 1.15
CLN5-206ENST00000635915 COPS6Q7L5N1 327 aa22.24■■□□□ 1.15
CLN5-206ENST00000635915 SSH3Q8TE77 659 aa22.24■■□□□ 1.15
CLN5-206ENST00000635915 LRRCC1Q9C099 1032 aa22.24■■□□□ 1.15
CLN5-206ENST00000635915 SHANK3Q9BYB0 1731 aa22.24■■□□□ 1.15
CLN5-206ENST00000635915 SRGAP3O43295 1099 aa22.23■■□□□ 1.15
CLN5-206ENST00000635915 C9orf78Q9NZ63 289 aaPredicted RBP22.23■■□□□ 1.15
CLN5-206ENST00000635915 IBTKQ9P2D0 1353 aaPredicted RBP22.23■■□□□ 1.15
CLN5-206ENST00000635915 DDX58O95786 925 aaKnown RBP22.23■■□□□ 1.15
CLN5-206ENST00000635915 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
CLN5-206ENST00000635915 RIC3Q7Z5B4 369 aa22.22■■□□□ 1.15
CLN5-206ENST00000635915 LRP10Q7Z4F1 713 aa22.22■■□□□ 1.15
CLN5-206ENST00000635915 PTCD1O75127 700 aaKnown RBP22.21■■□□□ 1.15
CLN5-206ENST00000635915 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
CLN5-206ENST00000635915 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
CLN5-206ENST00000635915 GLI3P10071 1580 aa22.21■■□□□ 1.15
CLN5-206ENST00000635915 ERVV-2B6SEH9 535 aa22.21■■□□□ 1.15
CLN5-206ENST00000635915 CDC45O75419 566 aa22.21■■□□□ 1.15
CLN5-206ENST00000635915 POLA2Q14181 598 aa22.21■■□□□ 1.15
CLN5-206ENST00000635915 LINS1Q8NG48 757 aa22.21■■□□□ 1.15
CLN5-206ENST00000635915 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
CLN5-206ENST00000635915 IGKV5-2P06315 115 aa22.2■■□□□ 1.14
CLN5-206ENST00000635915 SDSP20132 328 aa22.2■■□□□ 1.14
CLN5-206ENST00000635915 PDE1AP54750 535 aa22.2■■□□□ 1.14
CLN5-206ENST00000635915 IL1RAPL2Q9NP60 686 aa22.2■■□□□ 1.14
CLN5-206ENST00000635915 AHDC1Q5TGY3 1603 aaPredicted RBP22.19■■□□□ 1.14
CLN5-206ENST00000635915 ADAMTS2O95450 1211 aa22.17■■□□□ 1.14
CLN5-206ENST00000635915 MYD88Q99836 296 aa22.17■■□□□ 1.14
CLN5-206ENST00000635915 SALL3Q9BXA9 1300 aa22.17■■□□□ 1.14
CLN5-206ENST00000635915 GRM8O00222 908 aa22.17■■□□□ 1.14
CLN5-206ENST00000635915 ANKRD13DQ6ZTN6 518 aa22.17■■□□□ 1.14
CLN5-206ENST00000635915 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
CLN5-206ENST00000635915 COL16A1Q07092 1604 aaPredicted RBP22.16■■□□□ 1.14
CLN5-206ENST00000635915 NBPF26B4DH59 902 aa22.16■■□□□ 1.14
CLN5-206ENST00000635915 NBPF14Q5TI25 921 aa22.16■■□□□ 1.14
CLN5-206ENST00000635915 NBPF10Q6P3W6 841 aaKnown RBP22.16■■□□□ 1.14
CLN5-206ENST00000635915 NBPF15Q8N660 670 aa22.16■■□□□ 1.14
CLN5-206ENST00000635915 SUCLG2Q96I99 432 aa22.16■■□□□ 1.14
CLN5-206ENST00000635915 TBC1D2Q9BYX2 928 aa22.16■■□□□ 1.14
CLN5-206ENST00000635915 MX1P20591 662 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 KAZALD1Q96I82 304 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 OSBPL3Q9H4L5 887 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 TOGARAM1Q9Y4F4 1720 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 COL14A1Q05707 1796 aaKnown RBP22.15■■□□□ 1.14
CLN5-206ENST00000635915 NEURL1BA8MQ27 555 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 BECN1Q14457 450 aa22.15■■□□□ 1.14
CLN5-206ENST00000635915 JARID2Q92833 1246 aaPredicted RBP22.15■■□□□ 1.14
CLN5-206ENST00000635915 KCPQ6ZWJ8 1503 aa22.14■■□□□ 1.14
CLN5-206ENST00000635915 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.14
CLN5-206ENST00000635915 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.14
CLN5-206ENST00000635915 A1BGP04217 495 aa22.14■■□□□ 1.13
CLN5-206ENST00000635915 RBM25P49756 843 aaKnown RBP22.14■■□□□ 1.13
CLN5-206ENST00000635915 NUTM1Q86Y26 1132 aa22.14■■□□□ 1.13
CLN5-206ENST00000635915 RHPN1Q8TCX5 695 aa22.13■■□□□ 1.13
CLN5-206ENST00000635915 TMOD3Q9NYL9 352 aa22.13■■□□□ 1.13
CLN5-206ENST00000635915 PA2G4Q9UQ80 394 aaKnown RBP22.13■■□□□ 1.13
CLN5-206ENST00000635915 BICC1Q9H694 974 aaKnown RBP22.13■■□□□ 1.13
CLN5-206ENST00000635915 UBR2Q8IWV8 1755 aa22.13■■□□□ 1.13
CLN5-206ENST00000635915 ATP5J2-PTCD1G3V325 749 aa22.12■■□□□ 1.13
CLN5-206ENST00000635915 MTX1Q13505 466 aa22.12■■□□□ 1.13
CLN5-206ENST00000635915 GCKRQ14397 625 aa22.12■■□□□ 1.13
CLN5-206ENST00000635915 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
CLN5-206ENST00000635915 COL22A1Q8NFW1 1626 aaPredicted RBP22.12■■□□□ 1.13
CLN5-206ENST00000635915 ASAP1Q9ULH1 1129 aa22.12■■□□□ 1.13
CLN5-206ENST00000635915 UTYO14607 1347 aa22.11■■□□□ 1.13
CLN5-206ENST00000635915 RAB11FIP3O75154 756 aa22.11■■□□□ 1.13
CLN5-206ENST00000635915 PIGBQ92521 554 aa22.11■■□□□ 1.13
CLN5-206ENST00000635915 NUTM2BA6NNL0 878 aaPredicted RBP22.1■■□□□ 1.13
CLN5-206ENST00000635915 NUTM2EB1AL46 878 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms