RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 MAP2K2P36507 400 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 USP5P45974 858 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 KRT85P78386 507 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
SRSF4-208ENST00000634348 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 VCXQ9H320 206 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 USH1CQ9Y6N9 552 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
SRSF4-208ENST00000634348 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC110Q8TBZ0 833 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 ARFGAP3Q9NP61 516 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 PSMC4P43686 418 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 NUP62CLQ9H1M0 184 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 MAP7D1Q3KQU3 841 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 HMGB1P1B2RPK0 211 aaPredicted RBP13.1□□□□□ -0.31
SRSF4-208ENST00000634348 MGEA5O60502 916 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 GNAI2P04899 355 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.313e-8■■□□□ 12.2
SRSF4-208ENST00000634348 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
SRSF4-208ENST00000634348 TRMT1LQ7Z2T5 733 aaKnown RBP13.1□□□□□ -0.31
SRSF4-208ENST00000634348 DDX12PQ92771 950 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 TSNARE1Q96NA8 513 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
SRSF4-208ENST00000634348 SKAP1Q86WV1 359 aa13.1□□□□□ -0.31
SRSF4-208ENST00000634348 GCKP35557 465 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 CCDC94Q9BW85 323 aaPredicted RBP13.09□□□□□ -0.31
SRSF4-208ENST00000634348 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 STMN2Q93045 179 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 BUB1BO60566 1050 aaPredicted RBP13.09□□□□□ -0.31
SRSF4-208ENST00000634348 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 IKBKGQ9Y6K9 419 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 NEMFO60524 1076 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 GNAI3P08754 354 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 GBP1P32455 592 aa13.09□□□□□ -0.31
SRSF4-208ENST00000634348 ZBTB16Q05516 673 aa13.08□□□□□ -0.31
SRSF4-208ENST00000634348 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.31
SRSF4-208ENST00000634348 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 BICDL2A1A5D9 508 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 OPA1O60313 960 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
SRSF4-208ENST00000634348 RUFY3Q7L099 469 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 CCDC82Q8N4S0 544 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 TTC14Q96N46 770 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 AKNAQ7Z591 1439 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 MAP7Q14244 749 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
SRSF4-208ENST00000634348 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.32
SRSF4-208ENST00000634348 KIF20AO95235 890 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 ZBTB9Q96C00 473 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
SRSF4-208ENST00000634348 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
SRSF4-208ENST00000634348 GMNNO75496 209 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 RNF8O76064 485 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
SRSF4-208ENST00000634348 COMMD10Q9Y6G5 202 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 PFDN1O60925 122 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 AACSQ86V21 672 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.323e-10■■□□□ 11.9
SRSF4-208ENST00000634348 SPATA32Q96LK8 384 aa13.07□□□□□ -0.32
SRSF4-208ENST00000634348 STMN4Q9H169 189 aaPredicted RBP13.07□□□□□ -0.32
SRSF4-208ENST00000634348 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
SRSF4-208ENST00000634348 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
SRSF4-208ENST00000634348 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 TSNAXIP1Q2TAA8 658 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 TTC16Q8NEE8 873 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 MPHOSPH8Q99549 860 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 SYCE3A1L190 88 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 GUCY1B3Q02153 619 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 CEP135Q66GS9 1140 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 MCM4P33991 863 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 CCDC171Q6TFL3 1326 aa13.06□□□□□ -0.32
SRSF4-208ENST00000634348 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
SRSF4-208ENST00000634348 RAPGEF2Q9Y4G8 1499 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 AAMPQ13685 434 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 ALS2CR12Q96Q35 445 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 SPTY2D1Q68D10 685 aaPredicted RBP13.05□□□□□ -0.32
SRSF4-208ENST00000634348 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
SRSF4-208ENST00000634348 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
SRSF4-208ENST00000634348 NAA16Q6N069 864 aaPredicted RBP13.05□□□□□ -0.32
SRSF4-208ENST00000634348 B4GALNT4Q76KP1 1039 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms