RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 TSPYL6Q8N831 410 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 PMFBP1Q8TBY8 1022 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 COG3Q96JB2 828 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 EID1Q9Y6B2 187 aa5.7□□□□□ -1.5
CHD2-220ENST00000630813 PIK3C2AO00443 1686 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 FMN2Q9NZ56 1722 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 NWD1Q149M9 1564 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 FAM83GA6ND36 823 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 RNF40O75150 1001 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 VAMP4O75379 141 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 TRIM27P14373 513 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 APLP1P51693 650 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 COPS2P61201 443 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 DCTN1Q14203 1278 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 C8orf34Q49A92 452 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.69□□□□□ -1.5
CHD2-220ENST00000630813 FRAT1Q92837 279 aaPredicted RBP5.69□□□□□ -1.5
CHD2-220ENST00000630813 ANP32EQ9BTT0 268 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 MYH16Q9H6N6 1097 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 MAP3K19Q56UN5 1328 aa5.69□□□□□ -1.5
CHD2-220ENST00000630813 CHD2O14647 1828 aaKnown RBP5.69□□□□□ -1.5
CHD2-220ENST00000630813 FAM187AA6NFU0 413 aa5.68□□□□□ -1.5
CHD2-220ENST00000630813 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
CHD2-220ENST00000630813 C8orf58Q8NAV2 365 aa5.68□□□□□ -1.5
CHD2-220ENST00000630813 CLUAP1Q96AJ1 413 aa5.68□□□□□ -1.5
CHD2-220ENST00000630813 MBIPQ9NS73 344 aa5.68□□□□□ -1.5
CHD2-220ENST00000630813 NOB1Q9ULX3 412 aaKnown RBP5.68□□□□□ -1.5
CHD2-220ENST00000630813 ZNF142P52746 1687 aaPredicted RBP5.68□□□□□ -1.5
CHD2-220ENST00000630813 MAPK8IP3Q9UPT6 1336 aa5.68□□□□□ -1.5
CHD2-220ENST00000630813 PIK3R4Q99570 1358 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 ANKARQ7Z5J8 1434 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 USP54Q70EL1 1684 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 ST8SIA5O15466 376 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 FOXO3O43524 673 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 WFS1O76024 890 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 BRPF1P55201 1214 aaPredicted RBP5.67□□□□□ -1.5
CHD2-220ENST00000630813 PRR20EP86478 221 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 PRR20CP86479 221 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 PRR20DP86480 221 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 PRR20BP86481 221 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 PRR20AP86496 221 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 MVPQ14764 893 aaKnown RBP5.67□□□□□ -1.5
CHD2-220ENST00000630813 KRT24Q2M2I5 525 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 SULT6B1Q6IMI4 303 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 TMEM57Q8N5G2 664 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 DDX12PQ92771 950 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 USP19O94966 1318 aa5.67□□□□□ -1.5
CHD2-220ENST00000630813 CRB1P82279 1406 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 MAP3K7O43318 606 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 TSR1Q2NL82 804 aaKnown RBP5.66□□□□□ -1.5
CHD2-220ENST00000630813 SPRYD7Q5W111 196 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 DZIP1LQ8IYY4 767 aaKnown RBP5.66□□□□□ -1.5
CHD2-220ENST00000630813 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 DNAJC5Q9H3Z4 198 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 SMC4Q9NTJ3 1288 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 IFT57Q9NWB7 429 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 TTC21AQ8NDW8 1320 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 KDRP35968 1356 aa5.66□□□□□ -1.5
CHD2-220ENST00000630813 RNF223E7ERA6 249 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 CHL1O00533 1208 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 RGS3P49796 1198 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 INSM1Q01101 510 aaPredicted RBP5.65□□□□□ -1.5
CHD2-220ENST00000630813 MTHFSDQ2M296 383 aaKnown RBP5.65□□□□□ -1.5
CHD2-220ENST00000630813 ALDH1L2Q3SY69 923 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 NUTM2GQ5VZR2 741 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 ZNF598Q86UK7 904 aaKnown RBP5.65□□□□□ -1.5
CHD2-220ENST00000630813 ANKLE2Q86XL3 938 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 EMID1Q96A84 441 aaPredicted RBP5.65□□□□□ -1.5
CHD2-220ENST00000630813 CFAP44Q96MT7 982 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 EYA1Q99502 592 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 PNNQ9H307 717 aaKnown RBP5.65□□□□□ -1.5
CHD2-220ENST00000630813 AAASQ9NRG9 546 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 ZBTB40Q9NUA8 1239 aa5.65□□□□□ -1.5
CHD2-220ENST00000630813 IGSF1Q8N6C5 1336 aa5.65□□□□□ -1.51
CHD2-220ENST00000630813 SBNO1A3KN83 1393 aa5.65□□□□□ -1.51
CHD2-220ENST00000630813 ARHGEF10O15013 1369 aa5.65□□□□□ -1.51
CHD2-220ENST00000630813 RGS12O14924 1447 aa5.65□□□□□ -1.51
CHD2-220ENST00000630813 NFAT5O94916 1531 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 SETD1BQ9UPS6 1966 aaKnown RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 ELL2O00472 640 aaPredicted RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 ZBTB7BO15156 539 aaPredicted RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 EN1Q05925 392 aaPredicted RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 NBR1Q14596 966 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 MCM10Q7L590 875 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 SIRT2Q8IXJ6 389 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 NGDNQ8NEJ9 315 aaKnown RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 TATDN2Q93075 761 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 IPO9Q96P70 1041 aaKnown RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 MIS18AQ9NYP9 233 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 LAS1LQ9Y4W2 734 aaKnown RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 NPHP4O75161 1426 aaPredicted RBP5.64□□□□□ -1.51
CHD2-220ENST00000630813 ADGRL3Q9HAR2 1447 aa5.64□□□□□ -1.51
CHD2-220ENST00000630813 NBPF26B4DH59 902 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 C3orf80F5H4A9 247 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 DPYSL4O14531 572 aa5.63□□□□□ -1.51
CHD2-220ENST00000630813 ZPR1O75312 459 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms