RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CCDC173Q0VFZ6 552 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 MTX1Q13505 466 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 AMOTQ4VCS5 1084 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 KIF1BPQ96EK5 621 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
IGHV3-54-201ENST00000622166 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 PKP1Q13835 747 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 TSHZ3Q63HK5 1081 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 RILPL2Q969X0 211 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 PALD1Q9ULE6 856 aa11.7□□□□□ -0.54
IGHV3-54-201ENST00000622166 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 ADCY9O60503 1353 aa11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 ESPNB1AK53 854 aa11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 SURF6O75683 361 aaKnown RBP11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 HSPA4P34932 840 aa11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 ZNF530Q6P9A1 599 aaPredicted RBP11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 MST1RQ04912 1400 aa11.69□□□□□ -0.54
IGHV3-54-201ENST00000622166 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 SGSM2O43147 1006 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 NASPP49321 788 aaPredicted RBP11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 PSME1Q06323 249 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 TEFQ10587 303 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 ZSCAN23Q3MJ62 389 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 ARHGEF25Q86VW2 580 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 IL1RAPL2Q9NP60 686 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 HDAC5Q9UQL6 1122 aa11.68□□□□□ -0.54
IGHV3-54-201ENST00000622166 RAD50Q92878 1312 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 BTBD11A6QL63 1104 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 SRGAP3O43295 1099 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 KCNQ3O43525 872 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 PRPF40AO75400 957 aaKnown RBP11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 MBD3O95983 291 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 EIF2S2P20042 333 aaKnown RBP11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 CNTROBQ8N137 903 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
IGHV3-54-201ENST00000622166 KIF1AQ12756 1690 aa11.66□□□□□ -0.54
IGHV3-54-201ENST00000622166 PXDNQ92626 1479 aa11.66□□□□□ -0.54
IGHV3-54-201ENST00000622166 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
IGHV3-54-201ENST00000622166 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
IGHV3-54-201ENST00000622166 TRIM44Q96DX7 344 aaPredicted RBP11.66□□□□□ -0.54
IGHV3-54-201ENST00000622166 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
IGHV3-54-201ENST00000622166 ADAMTSL3P82987 1691 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 UTYO14607 1347 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 GLRX3O76003 335 aaKnown RBP11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 NCLP19338 710 aaKnown RBP11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 HS1BP3Q53T59 392 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 KSR2Q6VAB6 950 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 KCNB2Q92953 911 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 LRRC59Q96AG4 307 aaKnown RBP11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 TTC14Q96N46 770 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 IL25Q9H293 177 aa11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
IGHV3-54-201ENST00000622166 ABCC6O95255 1503 aa11.65□□□□□ -0.55
IGHV3-54-201ENST00000622166 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 GCP02774 474 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 C1orf141Q5JVX7 400 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 LRSAM1Q6UWE0 723 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 ANP32BQ92688 251 aaKnown RBP11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 RBSNQ9H1K0 784 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
IGHV3-54-201ENST00000622166 WDR33Q9C0J8 1336 aaKnown RBP11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 TMEM87AQ8NBN3 555 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 RUFY2Q8WXA3 655 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 PDLIM2Q96JY6 352 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 TMEM63CQ9P1W3 806 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 SCN11AQ9UI33 1791 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 PLEKHG2Q9H7P9 1386 aa11.63□□□□□ -0.55
IGHV3-54-201ENST00000622166 KIAA1211Q6ZU35 1233 aa11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 CLASRPQ8N2M8 674 aaKnown RBP11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 UPF3BQ9BZI7 483 aaKnown RBP11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 TM6SF1Q9BZW5 370 aa11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 ECHDC1Q9NTX5 307 aa11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
IGHV3-54-201ENST00000622166 RGPD5Q99666 1765 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms