RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 ZNF772Q68DY9 489 aaPredicted RBP12.27□□□□□ -0.44
COL25A1-209ENST00000622134 CTR9Q6PD62 1173 aa12.27□□□□□ -0.44
COL25A1-209ENST00000622134 ZKSCAN5Q9Y2L8 839 aa12.27□□□□□ -0.44
COL25A1-209ENST00000622134 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
COL25A1-209ENST00000622134 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.44
COL25A1-209ENST00000622134 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
COL25A1-209ENST00000622134 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.45
COL25A1-209ENST00000622134 IPO7O95373 1038 aaKnown RBP12.27□□□□□ -0.45
COL25A1-209ENST00000622134 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 TDO2P48775 406 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 TMCO3Q6UWJ1 677 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
COL25A1-209ENST00000622134 MAP3K12Q12852 859 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 CCDC152Q4G0S7 254 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 SIRT1Q96EB6 747 aa12.27□□□□□ -0.45
COL25A1-209ENST00000622134 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.45
COL25A1-209ENST00000622134 NOB1Q9ULX3 412 aaKnown RBP12.27□□□□□ -0.45
COL25A1-209ENST00000622134 TMEM132AQ24JP5 1023 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 KRT222Q8N1A0 295 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 SYCE3A1L190 88 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 GCP02774 474 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 KRT32Q14532 448 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
COL25A1-209ENST00000622134 FEZ1Q99689 392 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 MYD88Q99836 296 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 TSR2Q969E8 191 aaKnown RBP12.26□□□□□ -0.45
COL25A1-209ENST00000622134 CDKL5O76039 1030 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 UVSSAQ2YD98 709 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 KIF1BPQ96EK5 621 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 UBAC1Q9BSL1 405 aa12.26□□□□□ -0.45
COL25A1-209ENST00000622134 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
COL25A1-209ENST00000622134 KIAA0754O94854 1291 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 TPTE2Q6XPS3 522 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 USP5P45974 858 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 AACSQ86V21 672 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 ZGPATQ8N5A5 531 aaKnown RBP12.25□□□□□ -0.45
COL25A1-209ENST00000622134 CDK5RAP3Q96JB5 506 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 DCAF5Q96JK2 942 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 EYA3Q99504 573 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 SIL1Q9H173 461 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 TRAF1Q13077 416 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 GIMAP7Q8NHV1 300 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 PTPRCP08575 1304 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 BAG3O95817 575 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 GSTO1P78417 241 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 FKBP4Q02790 459 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL25A1-209ENST00000622134 UBXN4Q92575 508 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 TBC1D32Q96NH3 1257 aa12.25□□□□□ -0.45
COL25A1-209ENST00000622134 NEK4P51957 841 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 GTF2A1P52655 376 aaPredicted RBP12.24□□□□□ -0.45
COL25A1-209ENST00000622134 MCM10Q7L590 875 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 MPHOSPH6Q99547 160 aaKnown RBP12.24□□□□□ -0.45
COL25A1-209ENST00000622134 ABCF2Q9UG63 623 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 RBM25P49756 843 aaKnown RBP12.24□□□□□ -0.45
COL25A1-209ENST00000622134 FILIP1Q7Z7B0 1213 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 USP21Q9UK80 565 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 NPATQ14207 1427 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 POLR3DP05423 398 aaPredicted RBP12.24□□□□□ -0.45
COL25A1-209ENST00000622134 BMS1Q14692 1282 aaKnown RBP12.24□□□□□ -0.45
COL25A1-209ENST00000622134 OGFOD1Q8N543 542 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 PIK3C2GO75747 1445 aa12.24□□□□□ -0.45
COL25A1-209ENST00000622134 TNIP1Q15025 636 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 MTMR7Q9Y216 660 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 IL16Q14005 1332 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 YTHDC2Q9H6S0 1430 aaKnown RBP12.23□□□□□ -0.45
COL25A1-209ENST00000622134 TXLNBQ8N3L3 684 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 JMYQ8N9B5 988 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
COL25A1-209ENST00000622134 TTF1Q15361 905 aaPredicted RBP12.23□□□□□ -0.45
COL25A1-209ENST00000622134 KIF18AQ8NI77 898 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 PAXBP1Q9Y5B6 917 aa12.23□□□□□ -0.45
COL25A1-209ENST00000622134 IDH1O75874 414 aaKnown RBP12.22□□□□□ -0.45
COL25A1-209ENST00000622134 HLA-DOAP06340 250 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 IP6K1Q92551 441 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 YEATS2Q9ULM3 1422 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 MVPQ14764 893 aaKnown RBP12.22□□□□□ -0.45
COL25A1-209ENST00000622134 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 DNAI2Q9GZS0 605 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 EHMT1Q9H9B1 1298 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 TRPC5Q9UL62 973 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-209ENST00000622134 BCAR3O75815 825 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 MPNDQ8N594 471 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 WASF1Q92558 559 aa12.22□□□□□ -0.45
COL25A1-209ENST00000622134 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms