RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 PLEKHG2Q9H7P9 1386 aa25.08■■□□□ 1.61
MMP28-207ENST00000619655 PNMA6EA0A0J9YXQ4 647 aa25.08■■□□□ 1.61
MMP28-207ENST00000619655 MAP3K2Q9Y2U5 619 aa25.08■■□□□ 1.61
MMP28-207ENST00000619655 MYL6BP14649 208 aa25.08■■□□□ 1.61
MMP28-207ENST00000619655 BEND3Q5T5X7 828 aa25.08■■□□□ 1.61
MMP28-207ENST00000619655 EXOC6BQ9Y2D4 811 aa25.08■■□□□ 1.61
MMP28-207ENST00000619655 BMP2KLQ5H9B9 411 aa25.07■■□□□ 1.6
MMP28-207ENST00000619655 HYPKQ9NX55 129 aa25.07■■□□□ 1.6
MMP28-207ENST00000619655 DAXXQ9UER7 740 aaPredicted RBP25.07■■□□□ 1.6
MMP28-207ENST00000619655 MRC1P22897 1456 aa25.06■■□□□ 1.6
MMP28-207ENST00000619655 OTUD7AQ8TE49 926 aaPredicted RBP25.06■■□□□ 1.6
MMP28-207ENST00000619655 NBPF7P0C2Y1 421 aaPredicted RBP25.06■■□□□ 1.6
MMP28-207ENST00000619655 PLEKHM2Q8IWE5 1019 aa25.06■■□□□ 1.6
MMP28-207ENST00000619655 DDX21Q9NR30 783 aaKnown RBP eCLIP25.05■■□□□ 1.6
MMP28-207ENST00000619655 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
MMP28-207ENST00000619655 ATP8B2P98198 1209 aa25.04■■□□□ 1.6
MMP28-207ENST00000619655 PDIA6Q15084 440 aa25.04■■□□□ 1.6
MMP28-207ENST00000619655 FMNL2Q96PY5 1086 aa25.04■■□□□ 1.6
MMP28-207ENST00000619655 KSR2Q6VAB6 950 aa25.03■■□□□ 1.6
MMP28-207ENST00000619655 USP16Q9Y5T5 823 aa25.03■■□□□ 1.6
MMP28-207ENST00000619655 SNRPA1P09661 255 aaKnown RBP25.02■■□□□ 1.6
MMP28-207ENST00000619655 TBC1D32Q96NH3 1257 aa25.02■■□□□ 1.6
MMP28-207ENST00000619655 CWF19L2Q2TBE0 894 aaKnown RBP25.01■■□□□ 1.59
MMP28-207ENST00000619655 DDX58O95786 925 aaKnown RBP25.01■■□□□ 1.59
MMP28-207ENST00000619655 GSPT1P15170 499 aaKnown RBP25.01■■□□□ 1.59
MMP28-207ENST00000619655 LTBP4Q8N2S1 1624 aa25■■□□□ 1.59
MMP28-207ENST00000619655 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
MMP28-207ENST00000619655 RIC3Q7Z5B4 369 aa24.99■■□□□ 1.59
MMP28-207ENST00000619655 C9orf78Q9NZ63 289 aaPredicted RBP24.99■■□□□ 1.59
MMP28-207ENST00000619655 SHANK3Q9BYB0 1731 aa24.98■■□□□ 1.59
MMP28-207ENST00000619655 XAGE3Q8WTP9 111 aa24.98■■□□□ 1.59
MMP28-207ENST00000619655 TTC22Q5TAA0 569 aa24.97■■□□□ 1.59
MMP28-207ENST00000619655 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
MMP28-207ENST00000619655 C22orf23Q9BZE7 217 aa24.97■■□□□ 1.59
MMP28-207ENST00000619655 AHDC1Q5TGY3 1603 aaPredicted RBP24.97■■□□□ 1.59
MMP28-207ENST00000619655 SRGAP3O43295 1099 aa24.97■■□□□ 1.59
MMP28-207ENST00000619655 LRRCC1Q9C099 1032 aa24.97■■□□□ 1.59
MMP28-207ENST00000619655 ERVV-2B6SEH9 535 aa24.96■■□□□ 1.59
MMP28-207ENST00000619655 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
MMP28-207ENST00000619655 TBC1D9Q6ZT07 1266 aa24.96■■□□□ 1.59
MMP28-207ENST00000619655 PTCD1O75127 700 aaKnown RBP24.95■■□□□ 1.58
MMP28-207ENST00000619655 ADAMTS2O95450 1211 aa24.95■■□□□ 1.58
MMP28-207ENST00000619655 ALDH1L1O75891 902 aa24.94■■□□□ 1.58
MMP28-207ENST00000619655 NKX1-1Q15270 411 aaPredicted RBP24.94■■□□□ 1.58
MMP28-207ENST00000619655 COL14A1Q05707 1796 aaKnown RBP24.94■■□□□ 1.58
MMP28-207ENST00000619655 IBTKQ9P2D0 1353 aaPredicted RBP24.94■■□□□ 1.58
MMP28-207ENST00000619655 SSH3Q8TE77 659 aa24.94■■□□□ 1.58
MMP28-207ENST00000619655 SURF6O75683 361 aaKnown RBP24.93■■□□□ 1.58
MMP28-207ENST00000619655 NBR1Q14596 966 aa24.93■■□□□ 1.58
MMP28-207ENST00000619655 TSHZ3Q63HK5 1081 aa24.93■■□□□ 1.58
MMP28-207ENST00000619655 LINS1Q8NG48 757 aa24.93■■□□□ 1.58
MMP28-207ENST00000619655 CDC45O75419 566 aa24.92■■□□□ 1.58
MMP28-207ENST00000619655 COL16A1Q07092 1604 aaPredicted RBP24.91■■□□□ 1.58
MMP28-207ENST00000619655 NEXNQ0ZGT2 675 aa24.91■■□□□ 1.58
MMP28-207ENST00000619655 MYD88Q99836 296 aa24.91■■□□□ 1.58
MMP28-207ENST00000619655 IL1RAPL2Q9NP60 686 aa24.91■■□□□ 1.58
MMP28-207ENST00000619655 PHLPP1O60346 1717 aa24.91■■□□□ 1.58
MMP28-207ENST00000619655 GLI3P10071 1580 aa24.9■■□□□ 1.58
MMP28-207ENST00000619655 COL22A1Q8NFW1 1626 aaPredicted RBP24.9■■□□□ 1.58
MMP28-207ENST00000619655 IGKV5-2P06315 115 aa24.9■■□□□ 1.58
MMP28-207ENST00000619655 POLA2Q14181 598 aa24.9■■□□□ 1.58
MMP28-207ENST00000619655 ANKRD13DQ6ZTN6 518 aa24.9■■□□□ 1.58
MMP28-207ENST00000619655 TMOD3Q9NYL9 352 aa24.9■■□□□ 1.58
MMP28-207ENST00000619655 GRM8O00222 908 aa24.89■■□□□ 1.58
MMP28-207ENST00000619655 SDSP20132 328 aa24.89■■□□□ 1.58
MMP28-207ENST00000619655 PDE1AP54750 535 aa24.89■■□□□ 1.58
MMP28-207ENST00000619655 LRP10Q7Z4F1 713 aa24.89■■□□□ 1.58
MMP28-207ENST00000619655 NUTM2BA6NNL0 878 aaPredicted RBP24.89■■□□□ 1.57
MMP28-207ENST00000619655 NUTM2EB1AL46 878 aaPredicted RBP24.89■■□□□ 1.57
MMP28-207ENST00000619655 NUTM2AQ8IVF1 878 aaPredicted RBP24.89■■□□□ 1.57
MMP28-207ENST00000619655 LAMB4A4D0S4 1761 aa24.88■■□□□ 1.57
MMP28-207ENST00000619655 TOGARAM1Q9Y4F4 1720 aa24.88■■□□□ 1.57
MMP28-207ENST00000619655 BECN1Q14457 450 aa24.87■■□□□ 1.57
MMP28-207ENST00000619655 KAT6BQ8WYB5 2073 aa24.86■■□□□ 1.57
MMP28-207ENST00000619655 MX1P20591 662 aa24.86■■□□□ 1.57
MMP28-207ENST00000619655 METTL22Q9BUU2 404 aaPredicted RBP24.86■■□□□ 1.57
MMP28-207ENST00000619655 UBR2Q8IWV8 1755 aa24.86■■□□□ 1.57
MMP28-207ENST00000619655 KCPQ6ZWJ8 1503 aa24.86■■□□□ 1.57
MMP28-207ENST00000619655 NEURL1BA8MQ27 555 aa24.86■■□□□ 1.57
MMP28-207ENST00000619655 SUCLG2Q96I99 432 aa24.86■■□□□ 1.57
MMP28-207ENST00000619655 OS9Q13438 667 aaPredicted RBP24.85■■□□□ 1.57
MMP28-207ENST00000619655 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
MMP28-207ENST00000619655 A1BGP04217 495 aa24.85■■□□□ 1.57
MMP28-207ENST00000619655 NBPF14Q5TI25 921 aa24.85■■□□□ 1.57
MMP28-207ENST00000619655 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
MMP28-207ENST00000619655 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
MMP28-207ENST00000619655 PAPPAQ13219 1627 aa24.84■■□□□ 1.57
MMP28-207ENST00000619655 NUTM1Q86Y26 1132 aa24.84■■□□□ 1.57
MMP28-207ENST00000619655 RHPN1Q8TCX5 695 aa24.84■■□□□ 1.57
MMP28-207ENST00000619655 JARID2Q92833 1246 aaPredicted RBP24.84■■□□□ 1.57
MMP28-207ENST00000619655 OSBPL3Q9H4L5 887 aa24.84■■□□□ 1.57
MMP28-207ENST00000619655 BICC1Q9H694 974 aaKnown RBP24.84■■□□□ 1.57
MMP28-207ENST00000619655 ATP5J2-PTCD1G3V325 749 aa24.83■■□□□ 1.57
MMP28-207ENST00000619655 RAB11FIP3O75154 756 aa24.83■■□□□ 1.57
MMP28-207ENST00000619655 SALL3Q9BXA9 1300 aa24.83■■□□□ 1.57
MMP28-207ENST00000619655 GCKRQ14397 625 aa24.83■■□□□ 1.56
MMP28-207ENST00000619655 PIGBQ92521 554 aa24.83■■□□□ 1.56
MMP28-207ENST00000619655 ASAP1Q9ULH1 1129 aa24.83■■□□□ 1.56
MMP28-207ENST00000619655 HDAC5Q9UQL6 1122 aa24.83■■□□□ 1.56
MMP28-207ENST00000619655 TOM1O60784 492 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms