RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 KNDC1Q76NI1 1749 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 PHF14O94880 888 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 C16orf45Q96MC5 204 aaPredicted RBP16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 MYRIPQ8NFW9 859 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ERICH4A6NGS2 130 aa16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 V9GYY5 206 aaPredicted RBP16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 RTF1Q92541 710 aaKnown RBP16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 MSH6P52701 1360 aa16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ZBTB22O15209 634 aa16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 GNAI1P63096 354 aa16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 HMGN5P82970 282 aaKnown RBP16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
CNTNAP3B-215ENST00000619138 PLEKHF1Q96S99 279 aa16.49■□□□□ 0.23
CNTNAP3B-215ENST00000619138 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
CNTNAP3B-215ENST00000619138 TERF1P54274 439 aa16.49■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
CNTNAP3B-215ENST00000619138 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
CNTNAP3B-215ENST00000619138 MCM10Q7L590 875 aa16.49■□□□□ 0.23
CNTNAP3B-215ENST00000619138 RIOK3O14730 519 aaKnown RBP16.48■□□□□ 0.23
CNTNAP3B-215ENST00000619138 CPA1P15085 419 aa16.48■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ITSN1Q15811 1721 aa16.48■□□□□ 0.23
CNTNAP3B-215ENST00000619138 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
CNTNAP3B-215ENST00000619138 MCM5P33992 734 aa16.47■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
CNTNAP3B-215ENST00000619138 EYA1Q99502 592 aa16.47■□□□□ 0.23
CNTNAP3B-215ENST00000619138 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
CNTNAP3B-215ENST00000619138 DMTNQ08495 405 aa16.47■□□□□ 0.23
CNTNAP3B-215ENST00000619138 USP32Q8NFA0 1604 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 GCP02774 474 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 HOXC9P31274 260 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 NAA30Q147X3 362 aaPredicted RBP16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ANKARQ7Z5J8 1434 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 CHRNA2Q15822 529 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 KIF20BQ96Q89 1820 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ZBTB9Q96C00 473 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 PYCARDQ9ULZ3 195 aa16.46■□□□□ 0.23
CNTNAP3B-215ENST00000619138 AATKQ6ZMQ8 1374 aa16.46■□□□□ 0.22
CNTNAP3B-215ENST00000619138 VIRMAQ69YN4 1812 aaKnown RBP16.46■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
CNTNAP3B-215ENST00000619138 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
CNTNAP3B-215ENST00000619138 FLT4P35916 1363 aa16.45■□□□□ 0.22
CNTNAP3B-215ENST00000619138 KCNJ4P48050 445 aa16.45■□□□□ 0.22
CNTNAP3B-215ENST00000619138 FOSBP53539 338 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 KCNH5Q8NCM2 988 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 PNPLA6Q8IY17 1366 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CYP2E1P05181 493 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
CNTNAP3B-215ENST00000619138 HMMRO75330 724 aa16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 DIAPH3Q9NSV4 1193 aa16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 SMC3Q9UQE7 1217 aa16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 ZNF142P52746 1687 aaPredicted RBP16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 FAM173BQ6P4H8 233 aa16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 PTGS1P23219 599 aa16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 TNNT3P45378 269 aaPredicted RBP16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CHMP4AQ9BY43 222 aa16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 IBTKQ9P2D0 1353 aaPredicted RBP16.43■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CFAP44Q96MT7 982 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 OVOS2A0A0J9YW53 1432 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 OVOS2Q6IE36 1432 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 PRIMPOLQ96LW4 560 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 LRMPQ12912 555 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 OS9Q13438 667 aaPredicted RBP16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 SLAIN2Q9P270 581 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 PDE1AP54750 535 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CCDC183Q5T5S1 534 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CCDC83Q8IWF9 413 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 NPHP3Q7Z494 1330 aa16.41■□□□□ 0.22
CNTNAP3B-215ENST00000619138 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
CNTNAP3B-215ENST00000619138 BRD1O95696 1058 aa16.4■□□□□ 0.22
CNTNAP3B-215ENST00000619138 PDE4CQ08493 712 aa16.4■□□□□ 0.22
CNTNAP3B-215ENST00000619138 TPD52L1Q16890 204 aaPredicted RBP16.4■□□□□ 0.22
CNTNAP3B-215ENST00000619138 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
CNTNAP3B-215ENST00000619138 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.22
CNTNAP3B-215ENST00000619138 CEBPZQ03701 1054 aaKnown RBP16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 CCDC186Q7Z3E2 898 aa16.39■□□□□ 0.21
CNTNAP3B-215ENST00000619138 C1orf167Q5SNV9 1468 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms