RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	EIF4A2	Q14240	407 aa	Known RBP	13.85	□□□□□ -0.19
TP53-222	ENST00000617185	PWP2	Q15269	919 aa	Known RBP	13.85	□□□□□ -0.19
TP53-222	ENST00000617185	NFE2L2	Q16236	605 aa		13.85	□□□□□ -0.19
TP53-222	ENST00000617185	KCNF1	Q9H3M0	494 aa		13.85	□□□□□ -0.19
TP53-222	ENST00000617185	FAM135B	Q49AJ0	1406 aa		13.85	□□□□□ -0.19
TP53-222	ENST00000617185	TMEM57	Q8N5G2	664 aa		13.84	□□□□□ -0.19
TP53-222	ENST00000617185	NOL10	Q9BSC4	688 aa	Known RBP	13.84	□□□□□ -0.19
TP53-222	ENST00000617185	REC8	O95072	547 aa		13.84	□□□□□ -0.19
TP53-222	ENST00000617185	MYCN	P04198	464 aa	Predicted RBP	13.84	□□□□□ -0.19
TP53-222	ENST00000617185	MCM10	Q7L590	875 aa		13.84	□□□□□ -0.19
TP53-222	ENST00000617185	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.84	□□□□□ -0.19
TP53-222	ENST00000617185	ZGPAT	Q8N5A5	531 aa	Known RBP	13.84	□□□□□ -0.19
TP53-222	ENST00000617185	CCDC112	Q8NEF3	446 aa		13.84	□□□□□ -0.19
TP53-222	ENST00000617185	C3	P01024	1663 aa		13.84	□□□□□ -0.19
TP53-222	ENST00000617185	CDC42BPG	Q6DT37	1551 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	TECPR2	O15040	1411 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	DHX16	O60231	1041 aa	Known RBP	13.83	□□□□□ -0.2
TP53-222	ENST00000617185	C1orf115	Q9H7X2	142 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	MBIP	Q9NS73	344 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	MIS18A	Q9NYP9	233 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	ST18	O60284	1047 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	LTV1	Q96GA3	475 aa	Predicted RBP	13.83	□□□□□ -0.2
TP53-222	ENST00000617185	CFAP44	Q96MT7	982 aa		13.83	□□□□□ -0.2
TP53-222	ENST00000617185	MYCBP	Q99417	103 aa	Predicted RBP	13.83	□□□□□ -0.2
TP53-222	ENST00000617185	FOXO3	O43524	673 aa		13.82	□□□□□ -0.2
TP53-222	ENST00000617185	KMT5B	Q4FZB7	885 aa		13.82	□□□□□ -0.2
TP53-222	ENST00000617185	ATF7IP	Q6VMQ6	1270 aa		13.82	□□□□□ -0.2
TP53-222	ENST00000617185	KIF1BP	Q96EK5	621 aa		13.82	□□□□□ -0.2
TP53-222	ENST00000617185	CHAMP1	Q96JM3	812 aa		13.82	□□□□□ -0.2
TP53-222	ENST00000617185	CDC45	O75419	566 aa		13.82	□□□□□ -0.2
TP53-222	ENST00000617185	NAA30	Q147X3	362 aa	Predicted RBP	13.82	□□□□□ -0.2
TP53-222	ENST00000617185	ICE2	Q659A1	982 aa		13.81	□□□□□ -0.2
TP53-222	ENST00000617185	C8orf58	Q8NAV2	365 aa		13.81	□□□□□ -0.2
TP53-222	ENST00000617185	NCAPG	Q9BPX3	1015 aa		13.81	□□□□□ -0.2
TP53-222	ENST00000617185	MUM1L1	Q5H9M0	696 aa		13.81	□□□□□ -0.2
TP53-222	ENST00000617185	KCNG1	Q9UIX4	513 aa		13.81	□□□□□ -0.2
TP53-222	ENST00000617185	SIRT1	Q96EB6	747 aa		13.8	□□□□□ -0.2
TP53-222	ENST00000617185	BRMS1	Q9HCU9	246 aa		13.8	□□□□□ -0.2
TP53-222	ENST00000617185	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.8	□□□□□ -0.2
TP53-222	ENST00000617185	NLRP6	P59044	892 aa		13.8	□□□□□ -0.2
TP53-222	ENST00000617185	RBM6	P78332	1123 aa	Known RBP	13.8	□□□□□ -0.2
TP53-222	ENST00000617185	FER1L4	A9Z1Z3	1794 aa		13.8	□□□□□ -0.2
TP53-222	ENST00000617185	TNNT1	P13805	278 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	HCLS1	P14317	486 aa	Predicted RBP	13.79	□□□□□ -0.2
TP53-222	ENST00000617185	PLCB2	Q00722	1185 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	LMOD3	Q0VAK6	560 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	SLFNL1	Q499Z3	407 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	ZBTB40	Q9NUA8	1239 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	MAP3K19	Q56UN5	1328 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	USP6	P35125	1406 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	CT47B1	P0C2W7	299 aa	Predicted RBP	13.79	□□□□□ -0.2
TP53-222	ENST00000617185	C16orf45	Q96MC5	204 aa	Predicted RBP	13.79	□□□□□ -0.2
TP53-222	ENST00000617185	TBX22	Q9Y458	520 aa		13.79	□□□□□ -0.2
TP53-222	ENST00000617185	RGPD8	O14715	1765 aa	Predicted RBP	13.79	□□□□□ -0.2
TP53-222	ENST00000617185	PLEKHG3	A1L390	1219 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	CASQ1	P31415	396 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	CCDC183	Q5T5S1	534 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	ST7	Q9NRC1	585 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	VAMP4	O75379	141 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	BRD1	O95696	1058 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	AMPH	P49418	695 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	BRPF1	P55201	1214 aa	Predicted RBP	13.78	□□□□□ -0.2
TP53-222	ENST00000617185	BMS1	Q14692	1282 aa	Known RBP	13.78	□□□□□ -0.2
TP53-222	ENST00000617185	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.78	□□□□□ -0.2
TP53-222	ENST00000617185	CNPY4	Q8N129	248 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	TXLNB	Q8N3L3	684 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.78	□□□□□ -0.2
TP53-222	ENST00000617185	ITSN1	Q15811	1721 aa		13.78	□□□□□ -0.2
TP53-222	ENST00000617185	TWISTNB	Q3B726	338 aa	Predicted RBP	13.77	□□□□□ -0.2
TP53-222	ENST00000617185	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.77	□□□□□ -0.2
TP53-222	ENST00000617185	KNDC1	Q76NI1	1749 aa		13.77	□□□□□ -0.2
TP53-222	ENST00000617185	TEX35	Q5T0J7	233 aa		13.77	□□□□□ -0.21
TP53-222	ENST00000617185	MON2	Q7Z3U7	1717 aa		13.77	□□□□□ -0.21
TP53-222	ENST00000617185	AATK	Q6ZMQ8	1374 aa		13.77	□□□□□ -0.21
TP53-222	ENST00000617185	ANKRD45	Q5TZF3	282 aa		13.77	□□□□□ -0.21
TP53-222	ENST00000617185	USHBP1	Q8N6Y0	703 aa		13.77	□□□□□ -0.21
TP53-222	ENST00000617185	SPC24	Q8NBT2	197 aa		13.77	□□□□□ -0.21
TP53-222	ENST00000617185	IL16	Q14005	1332 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	GUCY2C	P25092	1073 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	FBXO38	Q6PIJ6	1188 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	ABTB2	Q8N961	1025 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	GCC1	Q96CN9	775 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	USP26	Q9BXU7	913 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.76	□□□□□ -0.21
TP53-222	ENST00000617185	TMX1	Q9H3N1	280 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	IFT57	Q9NWB7	429 aa		13.76	□□□□□ -0.21
TP53-222	ENST00000617185	MYO1C	O00159	1063 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	GNAI1	P63096	354 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	SYT10	Q6XYQ8	523 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	RAD50	Q92878	1312 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	MX1	P20591	662 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	C10orf67	Q8IYJ2	551 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	ZNF446	Q9NWS9	450 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	AKAP12	Q02952	1782 aa		13.75	□□□□□ -0.21
TP53-222	ENST00000617185	GADD45B	O75293	160 aa	Predicted RBP	13.74	□□□□□ -0.21
TP53-222	ENST00000617185	PRR29	P0C7W0	189 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	RNF20	Q5VTR2	975 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	LMOD2	Q6P5Q4	547 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	GOLGA6L1	Q8N7Z2	621 aa		13.74	□□□□□ -0.21
TP53-222	ENST00000617185	BANK1	Q8NDB2	785 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms