RNA–Protein interactions for RNA: ENST00000602351.5

PPFIA3-203, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 5 BASIC

Gene PPFIA3, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-203ENST00000602351 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-203ENST00000602351 TPM3P06753 285 aa17.64■□□□□ 0.41
PPFIA3-203ENST00000602351 PSMA5P28066 241 aa17.64■□□□□ 0.41
PPFIA3-203ENST00000602351 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
PPFIA3-203ENST00000602351 BICD2Q8TD16 824 aa17.64■□□□□ 0.41
PPFIA3-203ENST00000602351 NOL10Q9BSC4 688 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 ANTXR1Q9H6X2 564 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 LMTK3Q96Q04 1460 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 DIP2BQ9P265 1576 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 ERBB4Q15303 1308 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 HIP1O00291 1037 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
PPFIA3-203ENST00000602351 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 HS1BP3Q53T59 392 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 BICDL1Q6ZP65 573 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 CCAR2Q8N163 923 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 IP6K1Q92551 441 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 FLIIQ13045 1269 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 PRIMPOLQ96LW4 560 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 BTG4Q9NY30 223 aa17.62■□□□□ 0.41
PPFIA3-203ENST00000602351 AMOTL1Q8IY63 956 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 RBSNQ9H1K0 784 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 TBC1D9Q6ZT07 1266 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 SNX21Q969T3 373 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 NLRP1Q9C000 1473 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 NOLC1Q14978 699 aaKnown RBP eCLIP17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 TSC1Q92574 1164 aa17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 TTC12Q9H892 705 aaPredicted RBP17.61■□□□□ 0.41
PPFIA3-203ENST00000602351 PI4KAP2A4QPH2 592 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 MARCH6O60337 910 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 PI4KAP1Q8N8J0 262 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 CLSTN1O94985 981 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 LETM1O95202 739 aaPredicted RBP17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 NFXL1Q6ZNB6 911 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 NPHP4O75161 1426 aaPredicted RBP17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 EXOC5O00471 708 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 LRSAM1Q6UWE0 723 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 KIF6Q6ZMV9 814 aa17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 DNAJC2Q99543 621 aaKnown RBP17.6■□□□□ 0.41
PPFIA3-203ENST00000602351 TOM1O60784 492 aa17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 CREBRFQ8IUR6 639 aa17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 GTPBP4Q9BZE4 634 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 TERF1P54274 439 aa17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 GPS2Q13227 327 aa17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 NPC1L1Q9UHC9 1359 aa17.59■□□□□ 0.41
PPFIA3-203ENST00000602351 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.41
PPFIA3-203ENST00000602351 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.41
PPFIA3-203ENST00000602351 ERICH2A1L162 156 aa17.58■□□□□ 0.4
PPFIA3-203ENST00000602351 VAMP4O75379 141 aa17.58■□□□□ 0.4
PPFIA3-203ENST00000602351 ADCY5O95622 1261 aa17.58■□□□□ 0.4
PPFIA3-203ENST00000602351 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.4
PPFIA3-203ENST00000602351 MYD88Q99836 296 aa17.58■□□□□ 0.4
PPFIA3-203ENST00000602351 TRPM1Q7Z4N2 1603 aa17.57■□□□□ 0.4
PPFIA3-203ENST00000602351 FBXW7Q969H0 707 aa17.57■□□□□ 0.4
PPFIA3-203ENST00000602351 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-203ENST00000602351 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-203ENST00000602351 GPTP24298 496 aa17.57■□□□□ 0.4
PPFIA3-203ENST00000602351 MEIS3Q99687 375 aa17.57■□□□□ 0.4
PPFIA3-203ENST00000602351 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 PDCP20941 246 aa17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 G2E3Q7L622 706 aa17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 SETD1BQ9UPS6 1966 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-203ENST00000602351 CCDC73Q6ZRK6 1079 aa17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 SIRT1Q96EB6 747 aa17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 C16orf45Q96MC5 204 aaPredicted RBP17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 PHAXQ9H814 394 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 IL16Q14005 1332 aa17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-203ENST00000602351 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 PPP1R9BQ96SB3 815 aa17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 SAFBQ15424 915 aaKnown RBP eCLIP17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 VGLL3A8MV65 326 aa17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
PPFIA3-203ENST00000602351 FOSBP53539 338 aa17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 GOLGA6L1Q8N7Z2 621 aa17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 MNS1Q8NEH6 495 aa17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 ARGLU1Q9NWB6 273 aaPredicted RBP17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 HCLS1P14317 486 aaPredicted RBP17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
PPFIA3-203ENST00000602351 KCNQ3O43525 872 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms