RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 QTRT2Q9H974 415 aaKnown RBP7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 DLG5Q8TDM6 1919 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 GLI3P10071 1580 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 KCPQ6ZWJ8 1503 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 KDM2BQ8NHM5 1336 aa7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 BCL9O00512 1426 aa7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SNRPA1P09661 255 aaKnown RBP7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 KCNQ4P56696 695 aa7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 XAGE3Q8WTP9 111 aa7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 MEIS3Q99687 375 aa7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 TRPC5Q9UL62 973 aaPredicted RBP7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ADCY9O60503 1353 aa7.82□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ZBTB7BO15156 539 aaPredicted RBP7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 INTS3Q68E01 1043 aaKnown RBP7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 TTLL7Q6ZT98 887 aa7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SMIM5Q71RC9 77 aa7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ZBTB40Q9NUA8 1239 aa7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SHANK3Q9BYB0 1731 aa7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 PARP4Q9UKK3 1724 aaKnown RBP7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 TOGARAM1Q9Y4F4 1720 aa7.81□□□□□ -1.16
RNU4ATAC-201ENST00000580972 PTPRCP08575 1304 aa7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SOS1Q07889 1333 aaPredicted RBP7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 PI4KAP2A4QPH2 592 aa7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ITPK1Q13572 414 aa7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 COPS6Q7L5N1 327 aa7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 PI4KAP1Q8N8J0 262 aa7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 DDX21Q9NR30 783 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 DBF4Q9UBU7 674 aaPredicted RBP7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 RGS17Q9UGC6 210 aaPredicted RBP7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 DDX19BQ9UMR2 479 aa7.8□□□□□ -1.16
RNU4ATAC-201ENST00000580972 KDM3BQ7LBC6 1761 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 MS4A1P11836 297 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 BEND3Q5T5X7 828 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 FBXO41Q8TF61 875 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 DNAAF4Q8WXU2 420 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 JARID2Q92833 1246 aaPredicted RBP7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 MAP3K2Q9Y2U5 619 aa7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ZNF330Q9Y3S2 320 aaPredicted RBP7.79□□□□□ -1.16
RNU4ATAC-201ENST00000580972 CYP19A1P11511 503 aaPredicted RBP7.78□□□□□ -1.16
RNU4ATAC-201ENST00000580972 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
RNU4ATAC-201ENST00000580972 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
RNU4ATAC-201ENST00000580972 HYPKQ9NX55 129 aa7.78□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ZBTB1Q9Y2K1 713 aa7.78□□□□□ -1.16
RNU4ATAC-201ENST00000580972 PALLDQ8WX93 1383 aa7.78□□□□□ -1.16
RNU4ATAC-201ENST00000580972 THSD7AQ9UPZ6 1657 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 LOC102724428A0A0B4J2F2 783 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ONECUT3O60422 494 aaPredicted RBP7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 IGKV5-2P06315 115 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 CCT4P50991 539 aaKnown RBP7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SIK1P57059 783 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 KSR2Q6VAB6 950 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 MYD88Q99836 296 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ZBTB3Q9H5J0 574 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 NWD2Q9ULI1 1742 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ATP10DQ9P241 1426 aa7.77□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ATP6V1AP38606 617 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 CEP85Q6P2H3 762 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 INTS5Q6P9B9 1019 aaKnown RBP7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 CENPQQ7L2Z9 268 aaPredicted RBP7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SRCIN1Q9C0H9 1055 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 USP44Q9H0E7 712 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 PDZRN3Q9UPQ7 1066 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 LRRFIP2Q9Y608 721 aaKnown RBP7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SIPA1L3O60292 1781 aaPredicted RBP7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 C5P01031 1676 aa7.76□□□□□ -1.17
RNU4ATAC-201ENST00000580972 PAPPAQ13219 1627 aa7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 NBPF7P0C2Y1 421 aaPredicted RBP7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 CRKLP46109 303 aaKnown RBP7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 RGS3P49796 1198 aa7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 RIC3Q7Z5B4 369 aa7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SUCLG2Q96I99 432 aa7.75□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SCN11AQ9UI33 1791 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 PNMA6EA0A0J9YXQ4 647 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 NEURL1BA8MQ27 555 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 STARD3NLO95772 234 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 PDE4AP27815 886 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 RBM6P78332 1123 aaKnown RBP7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 HDAC1Q13547 482 aaPredicted RBP7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 HLFQ16534 295 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 EPHA10Q5JZY3 1008 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ZNF772Q68DY9 489 aaPredicted RBP7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ANKRD13DQ6ZTN6 518 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 KRT27Q7Z3Y8 459 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ANKRD44Q8N8A2 993 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ARXQ96QS3 562 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 METTL22Q9BUU2 404 aaPredicted RBP7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 BCL11AQ9H165 835 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 ERBB4Q15303 1308 aa7.74□□□□□ -1.17
RNU4ATAC-201ENST00000580972 WNK3Q9BYP7 1800 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 APBB1O00213 710 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 SMARCA5O60264 1052 aaPredicted RBP7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 TRIM37O94972 964 aa7.73□□□□□ -1.17
RNU4ATAC-201ENST00000580972 DDX58O95786 925 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms