RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 FMNL2Q96PY5 1086 aa34.42■■■■□ 3.1
LIMD2-203ENST00000578067 C5P01031 1676 aa34.42■■■■□ 3.1
LIMD2-203ENST00000578067 SNRPA1P09661 255 aaKnown RBP34.42■■■■□ 3.1
LIMD2-203ENST00000578067 NKX1-1Q15270 411 aaPredicted RBP34.42■■■■□ 3.1
LIMD2-203ENST00000578067 MAP3K2Q9Y2U5 619 aa34.42■■■■□ 3.1
LIMD2-203ENST00000578067 PNMA6EA0A0J9YXQ4 647 aa34.4■■■■□ 3.1
LIMD2-203ENST00000578067 ERVV-2B6SEH9 535 aa34.4■■■■□ 3.1
LIMD2-203ENST00000578067 TBC1D32Q96NH3 1257 aa34.4■■■■□ 3.1
LIMD2-203ENST00000578067 APBB1O00213 710 aa34.39■■■■□ 3.1
LIMD2-203ENST00000578067 DDX58O95786 925 aaKnown RBP34.39■■■■□ 3.1
LIMD2-203ENST00000578067 C16orf71Q8IYS4 520 aaPredicted RBP34.39■■■■□ 3.1
LIMD2-203ENST00000578067 BTG4Q9NY30 223 aa34.39■■■■□ 3.1
LIMD2-203ENST00000578067 ALDH1L1O75891 902 aa34.38■■■■□ 3.09
LIMD2-203ENST00000578067 SMARCA5O60264 1052 aaPredicted RBP34.37■■■■□ 3.09
LIMD2-203ENST00000578067 COL22A1Q8NFW1 1626 aaPredicted RBP34.36■■■■□ 3.09
LIMD2-203ENST00000578067 NBPF7P0C2Y1 421 aaPredicted RBP34.35■■■■□ 3.09
LIMD2-203ENST00000578067 DDX54Q8TDD1 881 aaKnown RBP34.35■■■■□ 3.09
LIMD2-203ENST00000578067 COL14A1Q05707 1796 aaKnown RBP34.35■■■■□ 3.09
LIMD2-203ENST00000578067 EXOC6BQ9Y2D4 811 aa34.35■■■■□ 3.09
LIMD2-203ENST00000578067 MFAP1P55081 439 aaKnown RBP34.34■■■■□ 3.09
LIMD2-203ENST00000578067 USP16Q9Y5T5 823 aa34.34■■■■□ 3.09
LIMD2-203ENST00000578067 SHANK3Q9BYB0 1731 aa34.34■■■■□ 3.09
LIMD2-203ENST00000578067 AIMP1Q12904 312 aaKnown RBP34.33■■■■□ 3.09
LIMD2-203ENST00000578067 SSH3Q8TE77 659 aa34.33■■■■□ 3.09
LIMD2-203ENST00000578067 DAXXQ9UER7 740 aaPredicted RBP34.33■■■■□ 3.09
LIMD2-203ENST00000578067 BCL11AQ9H165 835 aa34.33■■■■□ 3.09
LIMD2-203ENST00000578067 TTC22Q5TAA0 569 aa34.32■■■■□ 3.08
LIMD2-203ENST00000578067 OTUD7AQ8TE49 926 aaPredicted RBP34.32■■■■□ 3.08
LIMD2-203ENST00000578067 USP35Q9P2H5 1018 aa34.32■■■■□ 3.08
LIMD2-203ENST00000578067 MYL6BP14649 208 aa34.31■■■■□ 3.08
LIMD2-203ENST00000578067 GSPT1P15170 499 aaKnown RBP34.31■■■■□ 3.08
LIMD2-203ENST00000578067 IBTKQ9P2D0 1353 aaPredicted RBP34.31■■■■□ 3.08
LIMD2-203ENST00000578067 LINS1Q8NG48 757 aa34.3■■■■□ 3.08
LIMD2-203ENST00000578067 LRRCC1Q9C099 1032 aa34.3■■■■□ 3.08
LIMD2-203ENST00000578067 POLA2Q14181 598 aa34.29■■■■□ 3.08
LIMD2-203ENST00000578067 PPP1R42Q7Z4L9 355 aa34.29■■■■□ 3.08
LIMD2-203ENST00000578067 C22orf23Q9BZE7 217 aa34.29■■■■□ 3.08
LIMD2-203ENST00000578067 XAGE3Q8WTP9 111 aa34.28■■■■□ 3.08
LIMD2-203ENST00000578067 C9orf78Q9NZ63 289 aaPredicted RBP34.28■■■■□ 3.08
LIMD2-203ENST00000578067 GLI3P10071 1580 aa34.28■■■■□ 3.08
LIMD2-203ENST00000578067 RIC3Q7Z5B4 369 aa34.28■■■■□ 3.08
LIMD2-203ENST00000578067 HDAC5Q9UQL6 1122 aa34.28■■■■□ 3.08
LIMD2-203ENST00000578067 COPS6Q7L5N1 327 aa34.27■■■■□ 3.08
LIMD2-203ENST00000578067 COL16A1Q07092 1604 aaPredicted RBP34.27■■■■□ 3.08
LIMD2-203ENST00000578067 CWF19L2Q2TBE0 894 aaKnown RBP34.26■■■■□ 3.08
LIMD2-203ENST00000578067 LRP10Q7Z4F1 713 aa34.26■■■■□ 3.08
LIMD2-203ENST00000578067 CDC45O75419 566 aa34.26■■■■□ 3.07
LIMD2-203ENST00000578067 SLC4A3P48751 1232 aa34.25■■■■□ 3.07
LIMD2-203ENST00000578067 TBC1D9Q6ZT07 1266 aa34.25■■■■□ 3.07
LIMD2-203ENST00000578067 OSBPL3Q9H4L5 887 aa34.25■■■■□ 3.07
LIMD2-203ENST00000578067 LAMB4A4D0S4 1761 aa34.24■■■■□ 3.07
LIMD2-203ENST00000578067 SRGAP3O43295 1099 aa34.24■■■■□ 3.07
LIMD2-203ENST00000578067 UBR2Q8IWV8 1755 aa34.22■■■■□ 3.07
LIMD2-203ENST00000578067 PAPPAQ13219 1627 aa34.22■■■■□ 3.07
LIMD2-203ENST00000578067 RAB11FIP3O75154 756 aa34.22■■■■□ 3.07
LIMD2-203ENST00000578067 NEXNQ0ZGT2 675 aa34.22■■■■□ 3.07
LIMD2-203ENST00000578067 MTX1Q13505 466 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 UTYO14607 1347 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 ERBB4Q15303 1308 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 DISP2A7MBM2 1401 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 PDE1AP54750 535 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 ANKRD13DQ6ZTN6 518 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 METTL22Q9BUU2 404 aaPredicted RBP34.21■■■■□ 3.07
LIMD2-203ENST00000578067 KCPQ6ZWJ8 1503 aa34.21■■■■□ 3.07
LIMD2-203ENST00000578067 GRM8O00222 908 aa34.2■■■■□ 3.07
LIMD2-203ENST00000578067 PHLPP1O60346 1717 aa34.2■■■■□ 3.07
LIMD2-203ENST00000578067 SURF6O75683 361 aaKnown RBP34.2■■■■□ 3.06
LIMD2-203ENST00000578067 IGKV5-2P06315 115 aa34.2■■■■□ 3.06
LIMD2-203ENST00000578067 BECN1Q14457 450 aa34.2■■■■□ 3.06
LIMD2-203ENST00000578067 SALL3Q9BXA9 1300 aa34.19■■■■□ 3.06
LIMD2-203ENST00000578067 PIP4K2AP48426 406 aaPredicted RBP34.19■■■■□ 3.06
LIMD2-203ENST00000578067 TNS2Q63HR2 1409 aa34.18■■■■□ 3.06
LIMD2-203ENST00000578067 TMOD3Q9NYL9 352 aa34.18■■■■□ 3.06
LIMD2-203ENST00000578067 EIF5BO60841 1220 aaKnown RBP34.17■■■■□ 3.06
LIMD2-203ENST00000578067 TOGARAM1Q9Y4F4 1720 aa34.17■■■■□ 3.06
LIMD2-203ENST00000578067 SDSP20132 328 aa34.16■■■■□ 3.06
LIMD2-203ENST00000578067 NEURL1BA8MQ27 555 aa34.16■■■■□ 3.06
LIMD2-203ENST00000578067 RBM25P49756 843 aaKnown RBP34.16■■■■□ 3.06
LIMD2-203ENST00000578067 MYD88Q99836 296 aa34.16■■■■□ 3.06
LIMD2-203ENST00000578067 HSP90AB4PQ58FF6 505 aa34.14■■■■□ 3.06
LIMD2-203ENST00000578067 PLCH1Q4KWH8 1693 aa34.14■■■■□ 3.06
LIMD2-203ENST00000578067 TOM1O60784 492 aa34.14■■■■□ 3.06
LIMD2-203ENST00000578067 PTCD1O75127 700 aaKnown RBP34.14■■■■□ 3.06
LIMD2-203ENST00000578067 MX1P20591 662 aa34.14■■■■□ 3.06
LIMD2-203ENST00000578067 NBPF26B4DH59 902 aa34.13■■■■□ 3.05
LIMD2-203ENST00000578067 GCKRQ14397 625 aa34.13■■■■□ 3.05
LIMD2-203ENST00000578067 NBPF14Q5TI25 921 aa34.13■■■■□ 3.05
LIMD2-203ENST00000578067 NBPF10Q6P3W6 841 aaKnown RBP34.13■■■■□ 3.05
LIMD2-203ENST00000578067 NBPF15Q8N660 670 aa34.13■■■■□ 3.05
LIMD2-203ENST00000578067 RHPN1Q8TCX5 695 aa34.12■■■■□ 3.05
LIMD2-203ENST00000578067 KIF1BPQ96EK5 621 aa34.12■■■■□ 3.05
LIMD2-203ENST00000578067 SUCLG2Q96I99 432 aa34.12■■■■□ 3.05
LIMD2-203ENST00000578067 STAP2Q9UGK3 403 aa34.12■■■■□ 3.05
LIMD2-203ENST00000578067 PLBD2Q8NHP8 589 aa34.11■■■■□ 3.05
LIMD2-203ENST00000578067 ADAMTS2O95450 1211 aa34.11■■■■□ 3.05
LIMD2-203ENST00000578067 EXOC5O00471 708 aa34.09■■■■□ 3.05
LIMD2-203ENST00000578067 KAZALD1Q96I82 304 aa34.09■■■■□ 3.05
LIMD2-203ENST00000578067 IL1RAPL2Q9NP60 686 aa34.09■■■■□ 3.05
LIMD2-203ENST00000578067 CASC1Q6TDU7 716 aa34.09■■■■□ 3.05
LIMD2-203ENST00000578067 PIP4K2BP78356 416 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms