RNA–Protein interactions for RNA: ENST00000568733.5

NUB1-212, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUB1, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-212ENST00000568733 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
NUB1-212ENST00000568733 SRP68Q9UHB9 627 aaKnown RBP16.64■□□□□ 0.25
NUB1-212ENST00000568733 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
NUB1-212ENST00000568733 GNPATO15228 680 aa16.64■□□□□ 0.25
NUB1-212ENST00000568733 HSP90AB1P08238 724 aaKnown RBP16.64■□□□□ 0.25
NUB1-212ENST00000568733 NBPF14Q5TI25 921 aa16.64■□□□□ 0.25
NUB1-212ENST00000568733 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
NUB1-212ENST00000568733 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
NUB1-212ENST00000568733 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
NUB1-212ENST00000568733 EXOC6BQ9Y2D4 811 aa16.64■□□□□ 0.25
NUB1-212ENST00000568733 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
NUB1-212ENST00000568733 SIK1P57059 783 aa16.63■□□□□ 0.25
NUB1-212ENST00000568733 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
NUB1-212ENST00000568733 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
NUB1-212ENST00000568733 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
NUB1-212ENST00000568733 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
NUB1-212ENST00000568733 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
NUB1-212ENST00000568733 ITPK1Q13572 414 aa16.62■□□□□ 0.25
NUB1-212ENST00000568733 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
NUB1-212ENST00000568733 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
NUB1-212ENST00000568733 FBXO41Q8TF61 875 aa16.62■□□□□ 0.25
NUB1-212ENST00000568733 OS9Q13438 667 aaPredicted RBP16.61■□□□□ 0.25
NUB1-212ENST00000568733 HLFQ16534 295 aa16.61■□□□□ 0.25
NUB1-212ENST00000568733 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
NUB1-212ENST00000568733 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
NUB1-212ENST00000568733 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
NUB1-212ENST00000568733 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
NUB1-212ENST00000568733 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
NUB1-212ENST00000568733 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
NUB1-212ENST00000568733 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
NUB1-212ENST00000568733 ANKRD13DQ6ZTN6 518 aa16.6■□□□□ 0.25
NUB1-212ENST00000568733 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
NUB1-212ENST00000568733 MVPQ14764 893 aaKnown RBP16.59■□□□□ 0.25
NUB1-212ENST00000568733 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.25
NUB1-212ENST00000568733 FAM196AQ6ZSG2 479 aa16.58■□□□□ 0.24
NUB1-212ENST00000568733 C16orf71Q8IYS4 520 aaPredicted RBP16.58■□□□□ 0.24
NUB1-212ENST00000568733 HCLS1P14317 486 aaPredicted RBP16.58■□□□□ 0.24
NUB1-212ENST00000568733 STARD3NLO95772 234 aa16.57■□□□□ 0.24
NUB1-212ENST00000568733 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
NUB1-212ENST00000568733 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
NUB1-212ENST00000568733 DNAAF4Q8WXU2 420 aa16.57■□□□□ 0.24
NUB1-212ENST00000568733 TFCP2L1Q9NZI6 479 aa16.57■□□□□ 0.24
NUB1-212ENST00000568733 KIF1AQ12756 1690 aa16.57■□□□□ 0.24
NUB1-212ENST00000568733 A0A087WZG4 1122 aa16.57■□□□□ 0.24
NUB1-212ENST00000568733 RBM6P78332 1123 aaKnown RBP16.56■□□□□ 0.24
NUB1-212ENST00000568733 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
NUB1-212ENST00000568733 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
NUB1-212ENST00000568733 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
NUB1-212ENST00000568733 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
NUB1-212ENST00000568733 SLIT3O75094 1523 aa16.56■□□□□ 0.24
NUB1-212ENST00000568733 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
NUB1-212ENST00000568733 SNAP23O00161 211 aa16.55■□□□□ 0.24
NUB1-212ENST00000568733 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
NUB1-212ENST00000568733 ZBTB47Q9UFB7 747 aaPredicted RBP16.55■□□□□ 0.24
NUB1-212ENST00000568733 IL16Q14005 1332 aa16.55■□□□□ 0.24
NUB1-212ENST00000568733 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
NUB1-212ENST00000568733 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
NUB1-212ENST00000568733 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
NUB1-212ENST00000568733 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
NUB1-212ENST00000568733 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
NUB1-212ENST00000568733 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
NUB1-212ENST00000568733 ZNF772Q68DY9 489 aaPredicted RBP16.54■□□□□ 0.24
NUB1-212ENST00000568733 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
NUB1-212ENST00000568733 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
NUB1-212ENST00000568733 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
NUB1-212ENST00000568733 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
NUB1-212ENST00000568733 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 SRGAP3O43295 1099 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
NUB1-212ENST00000568733 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■□□□ 12.8
NUB1-212ENST00000568733 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
NUB1-212ENST00000568733 PDIA6Q15084 440 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
NUB1-212ENST00000568733 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
NUB1-212ENST00000568733 NDUFB9Q9Y6M9 179 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
NUB1-212ENST00000568733 COL16A1Q07092 1604 aaPredicted RBP16.53■□□□□ 0.24
NUB1-212ENST00000568733 DDX21Q9NR30 783 aaKnown RBP eCLIP16.52■□□□□ 0.24
NUB1-212ENST00000568733 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.23
NUB1-212ENST00000568733 SURF6O75683 361 aaKnown RBP16.52■□□□□ 0.23
NUB1-212ENST00000568733 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.23
NUB1-212ENST00000568733 AK7Q96M32 723 aa16.52■□□□□ 0.23
NUB1-212ENST00000568733 TRMT112Q9UI30 125 aaKnown RBP16.51■□□□□ 0.23
NUB1-212ENST00000568733 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
NUB1-212ENST00000568733 NIP7Q9Y221 180 aaKnown RBP eCLIP16.51■□□□□ 0.23
NUB1-212ENST00000568733 KIF6Q6ZMV9 814 aa16.5■□□□□ 0.23
NUB1-212ENST00000568733 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
NUB1-212ENST00000568733 SF3B2Q13435 895 aaKnown RBP16.5■□□□□ 0.23
NUB1-212ENST00000568733 USP44Q9H0E7 712 aa16.5■□□□□ 0.23
NUB1-212ENST00000568733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
NUB1-212ENST00000568733 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
NUB1-212ENST00000568733 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
NUB1-212ENST00000568733 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
NUB1-212ENST00000568733 RFC4P35249 363 aa16.49■□□□□ 0.23
NUB1-212ENST00000568733 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
NUB1-212ENST00000568733 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
NUB1-212ENST00000568733 HEG1Q9ULI3 1381 aa16.48■□□□□ 0.23
NUB1-212ENST00000568733 IGKV5-2P06315 115 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms