RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 MAP3K7O43318 606 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 MFAP1P55081 439 aaKnown RBP9.31□□□□□ -0.92
CFDP1-202ENST00000562602 SKOR2Q2VWA4 1001 aaPredicted RBP9.31□□□□□ -0.92
CFDP1-202ENST00000562602 TWISTNBQ3B726 338 aaPredicted RBP9.31□□□□□ -0.92
CFDP1-202ENST00000562602 RPAP2Q8IXW5 612 aaPredicted RBP9.31□□□□□ -0.92
CFDP1-202ENST00000562602 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 KIAA0232Q92628 1395 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 KNDC1Q76NI1 1749 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 PTPRCP08575 1304 aa9.31□□□□□ -0.92
CFDP1-202ENST00000562602 SOS1Q07889 1333 aaPredicted RBP9.31□□□□□ -0.92
CFDP1-202ENST00000562602 PLEKHG3A1L390 1219 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 MCM4P33991 863 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 INTS3Q68E01 1043 aaKnown RBP9.3□□□□□ -0.92
CFDP1-202ENST00000562602 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 WAPLQ7Z5K2 1190 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 GBP4Q96PP9 640 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 CHMP4AQ9BY43 222 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 SLKQ9H2G2 1235 aaPredicted RBP9.3□□□□□ -0.92
CFDP1-202ENST00000562602 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 MYO5BQ9ULV0 1848 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 CPS1P31327 1500 aa9.3□□□□□ -0.92
CFDP1-202ENST00000562602 TNRQ92752 1358 aa9.29□□□□□ -0.92
CFDP1-202ENST00000562602 CDC45O75419 566 aa9.29□□□□□ -0.92
CFDP1-202ENST00000562602 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
CFDP1-202ENST00000562602 ANKRD45Q5TZF3 282 aa9.29□□□□□ -0.92
CFDP1-202ENST00000562602 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
CFDP1-202ENST00000562602 TTC21AQ8NDW8 1320 aa9.29□□□□□ -0.92
CFDP1-202ENST00000562602 TMEM2Q9UHN6 1383 aa9.28□□□□□ -0.92
CFDP1-202ENST00000562602 GOLGA6L3A6NEY3 463 aa9.28□□□□□ -0.92
CFDP1-202ENST00000562602 HTATSF1O43719 755 aaKnown RBP9.28□□□□□ -0.92
CFDP1-202ENST00000562602 HMMRO75330 724 aa9.28□□□□□ -0.92
CFDP1-202ENST00000562602 PHACTR3Q96KR7 559 aa9.28□□□□□ -0.92
CFDP1-202ENST00000562602 DCTPP1Q9H773 170 aa9.28□□□□□ -0.92
CFDP1-202ENST00000562602 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
CFDP1-202ENST00000562602 SETD1AO15047 1707 aaKnown RBP9.28□□□□□ -0.92
CFDP1-202ENST00000562602 PLEKHG1Q9ULL1 1385 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 GOLGA6L22H0YM25 854 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 CHL1O00533 1208 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 HSP90AB1P08238 724 aaKnown RBP9.27□□□□□ -0.93
CFDP1-202ENST00000562602 HMOX1P09601 288 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 NME9Q86XW9 330 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 LNPKQ9C0E8 428 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 BABAM1Q9NWV8 329 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 EMILIN1Q9Y6C2 1016 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 NCOA3Q9Y6Q9 1424 aa9.27□□□□□ -0.93
CFDP1-202ENST00000562602 METP08581 1390 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 ITGBL1O95965 494 aaPredicted RBP9.26□□□□□ -0.93
CFDP1-202ENST00000562602 MRE11P49959 708 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 PRSS12P56730 875 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 RABEP1Q15276 862 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 ANKRD44Q8N8A2 993 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 EID1Q9Y6B2 187 aa9.26□□□□□ -0.93
CFDP1-202ENST00000562602 ARHGEF10O15013 1369 aa9.25□□□□□ -0.93
CFDP1-202ENST00000562602 USP31Q70CQ4 1352 aa9.25□□□□□ -0.93
CFDP1-202ENST00000562602 MON2Q7Z3U7 1717 aa9.25□□□□□ -0.93
CFDP1-202ENST00000562602 A0A0G2JS52 829 aa9.25□□□□□ -0.93
CFDP1-202ENST00000562602 SMAPO00193 183 aa9.25□□□□□ -0.93
CFDP1-202ENST00000562602 HSP90AA1P07900 732 aaKnown RBP9.25□□□□□ -0.93
CFDP1-202ENST00000562602 CCT4P50991 539 aaKnown RBP9.25□□□□□ -0.93
CFDP1-202ENST00000562602 NRKQ7Z2Y5 1582 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 NRXN3Q9Y4C0 1643 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 K7ELQ4 463 aaPredicted RBP9.24□□□□□ -0.93
CFDP1-202ENST00000562602 TRAK2O60296 914 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 DDIT3P35638 169 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 CLEC17AQ6ZS10 378 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 PACS2Q86VP3 889 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 C8orf58Q8NAV2 365 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 GAS2L2Q8NHY3 880 aa9.24□□□□□ -0.93
CFDP1-202ENST00000562602 RTF1Q92541 710 aaKnown RBP9.24□□□□□ -0.93
CFDP1-202ENST00000562602 CWC22Q9HCG8 908 aaKnown RBP9.24□□□□□ -0.93
CFDP1-202ENST00000562602 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
CFDP1-202ENST00000562602 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
CFDP1-202ENST00000562602 OVOS2A0A0J9YW53 1432 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 OVOS2Q6IE36 1432 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 C3P01024 1663 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 AKAP12Q02952 1782 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 FSD2A1L4K1 749 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 REC8O95072 547 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 NUCB2P80303 420 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 EIF4A2Q14240 407 aaKnown RBP9.23□□□□□ -0.93
CFDP1-202ENST00000562602 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 SULT6B1Q6IMI4 303 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 TBC1D9Q6ZT07 1266 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 TSPYL6Q8N831 410 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 TBX22Q9Y458 520 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 ADAMTSL3P82987 1691 aa9.23□□□□□ -0.93
CFDP1-202ENST00000562602 USP6P35125 1406 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 ITSN1Q15811 1721 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 EPB41L2O43491 1005 aaKnown RBP9.22□□□□□ -0.93
CFDP1-202ENST00000562602 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.22□□□□□ -0.93
CFDP1-202ENST00000562602 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 ACEP12821 1306 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 SBNO1A3KN83 1393 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms