RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 C5P01031 1676 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 PDLIM2Q96JY6 352 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 UBR2Q8IWV8 1755 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 MX1P20591 662 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 HSP90AB4PQ58FF6 505 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 TTC41PQ6P2S7 1318 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 TMEM94Q12767 1356 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 RFX7Q2KHR2 1363 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 JCADQ9P266 1359 aa7.88□□□□□ -1.15
AC087516.2-201ENST00000558963 COL22A1Q8NFW1 1626 aaPredicted RBP7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 SPEF2Q9C093 1822 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 ELL2O00472 640 aaPredicted RBP7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 OFD1O75665 1012 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 MCCP23508 829 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 NASPP49321 788 aaPredicted RBP7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 MLECQ14165 292 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 IL17REQ8NFR9 667 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 LMBRD1Q9NUN5 540 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 TOM1O60784 492 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 CHMLP26374 656 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 SSFA2P28290 1259 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 AMPHP49418 695 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 KRT24Q2M2I5 525 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 G2E3Q7L622 706 aa7.87□□□□□ -1.15
AC087516.2-201ENST00000558963 ZNF500O60304 480 aaPredicted RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 ALDH1L1O75891 902 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 MBD3O95983 291 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 USP44Q9H0E7 712 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 COL16A1Q07092 1604 aaPredicted RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 BRD1O95696 1058 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 KCNA4P22459 653 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 MCM5P33992 734 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 NGDNQ8NEJ9 315 aaKnown RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 NUP188Q5SRE5 1749 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 HSPA4P34932 840 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 EIF4A1P60842 406 aaKnown RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 AKAP4Q5JQC9 854 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 C16orf71Q8IYS4 520 aaPredicted RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 OTUD7AQ8TE49 926 aaPredicted RBP7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 PDCL3Q9H2J4 239 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 RAD50Q92878 1312 aa7.86□□□□□ -1.15
AC087516.2-201ENST00000558963 ANP32BQ92688 251 aaKnown RBP7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 ARFGEF2Q9Y6D5 1785 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 FOXO3O43524 673 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 PI4K2BQ8TCG2 481 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 KIF1BPQ96EK5 621 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 RBM42Q9BTD8 480 aaKnown RBP7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 ALDH8A1Q9H2A2 487 aaPredicted RBP7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 NOL7Q9UMY1 257 aaKnown RBP7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 ZDHHC9Q9Y397 364 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 DDX49Q9Y6V7 483 aaKnown RBP7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 ADCY9O60503 1353 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 PHLPP1O60346 1717 aa7.85□□□□□ -1.15
AC087516.2-201ENST00000558963 RGPD5Q99666 1765 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 BEND3Q5T5X7 828 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 TM6SF1Q9BZW5 370 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 PHF8Q9UPP1 1060 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 KCNA6P17658 529 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 NLRP6P59044 892 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 ARXQ96QS3 562 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 SLC26A8Q96RN1 970 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 ROBO1Q9Y6N7 1651 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 PXDNQ92626 1479 aa7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 RPAP1Q9BWH6 1393 aaPredicted RBP7.84□□□□□ -1.15
AC087516.2-201ENST00000558963 UBTFL1P0CB47 393 aaPredicted RBP7.84□□□□□ -1.16
AC087516.2-201ENST00000558963 ZSCAN23Q3MJ62 389 aa7.84□□□□□ -1.16
AC087516.2-201ENST00000558963 ERC1Q8IUD2 1116 aa7.84□□□□□ -1.16
AC087516.2-201ENST00000558963 DDX60Q8IY21 1712 aaKnown RBP7.84□□□□□ -1.16
AC087516.2-201ENST00000558963 PNMA6EA0A0J9YXQ4 647 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 SGSM2O43147 1006 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 HSPA2P54652 639 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 TTC14Q96N46 770 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 MAP7D2Q96T17 732 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 MYH15Q9Y2K3 1946 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 FKBP5Q13451 457 aaPredicted RBP7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 TMX3Q96JJ7 454 aa7.83□□□□□ -1.16
AC087516.2-201ENST00000558963 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 SMARCA5O60264 1052 aaPredicted RBP7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 ARHGEF25Q86VW2 580 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 ANKLE2Q86XL3 938 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 TJP1Q07157 1748 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 MSNP26038 577 aaKnown RBP7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 KIAA1211Q6ZU35 1233 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 DNAAF4Q8WXU2 420 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 DBF4Q9UBU7 674 aaPredicted RBP7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 LRRFIP2Q9Y608 721 aaKnown RBP7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 CCDC171Q6TFL3 1326 aa7.82□□□□□ -1.16
AC087516.2-201ENST00000558963 F6X3S4 739 aa7.81□□□□□ -1.16
AC087516.2-201ENST00000558963 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
AC087516.2-201ENST00000558963 LRSAM1Q6UWE0 723 aa7.81□□□□□ -1.16
AC087516.2-201ENST00000558963 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.81□□□□□ -1.16
AC087516.2-201ENST00000558963 WDR33Q9C0J8 1336 aaKnown RBP7.81□□□□□ -1.16
AC087516.2-201ENST00000558963 HIP1O00291 1037 aa7.81□□□□□ -1.16
AC087516.2-201ENST00000558963 GLRX3O76003 335 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms