RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
EFCAB11-209ENST00000556005 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
EFCAB11-209ENST00000556005 ADCY9O60503 1353 aa12.52□□□□□ -0.41
EFCAB11-209ENST00000556005 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 APBB1O00213 710 aa12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 ALDH1L1O75891 902 aa12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
EFCAB11-209ENST00000556005 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
EFCAB11-209ENST00000556005 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
EFCAB11-209ENST00000556005 BECN1Q14457 450 aa12.5□□□□□ -0.41
EFCAB11-209ENST00000556005 PDIA6Q15084 440 aa12.5□□□□□ -0.41
EFCAB11-209ENST00000556005 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
EFCAB11-209ENST00000556005 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
EFCAB11-209ENST00000556005 NBPF7P0C2Y1 421 aaPredicted RBP12.49□□□□□ -0.41
EFCAB11-209ENST00000556005 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
EFCAB11-209ENST00000556005 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
EFCAB11-209ENST00000556005 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
EFCAB11-209ENST00000556005 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
EFCAB11-209ENST00000556005 CDC45O75419 566 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 AIMP1Q12904 312 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 LINS1Q8NG48 757 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 C9orf78Q9NZ63 289 aaPredicted RBP12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
EFCAB11-209ENST00000556005 RAB11FIP3O75154 756 aa12.47□□□□□ -0.41
EFCAB11-209ENST00000556005 MYL6BP14649 208 aa12.47□□□□□ -0.41
EFCAB11-209ENST00000556005 NEXNQ0ZGT2 675 aa12.47□□□□□ -0.41
EFCAB11-209ENST00000556005 POLA2Q14181 598 aa12.47□□□□□ -0.41
EFCAB11-209ENST00000556005 TBC1D9Q6ZT07 1266 aa12.47□□□□□ -0.41
EFCAB11-209ENST00000556005 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
EFCAB11-209ENST00000556005 COPS6Q7L5N1 327 aa12.46□□□□□ -0.41
EFCAB11-209ENST00000556005 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
EFCAB11-209ENST00000556005 USP35Q9P2H5 1018 aa12.46□□□□□ -0.41
EFCAB11-209ENST00000556005 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.41
EFCAB11-209ENST00000556005 AHDC1Q5TGY3 1603 aaPredicted RBP12.46□□□□□ -0.42
EFCAB11-209ENST00000556005 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.42
EFCAB11-209ENST00000556005 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.42
EFCAB11-209ENST00000556005 CASC1Q6TDU7 716 aa12.46□□□□□ -0.42
EFCAB11-209ENST00000556005 XAGE3Q8WTP9 111 aa12.46□□□□□ -0.42
EFCAB11-209ENST00000556005 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 PDE1AP54750 535 aa12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 MTX1Q13505 466 aa12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 CWF19L2Q2TBE0 894 aaKnown RBP12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 UTYO14607 1347 aa12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
EFCAB11-209ENST00000556005 GRM8O00222 908 aa12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 C5P01031 1676 aa12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 SDSP20132 328 aa12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 MX1P20591 662 aa12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
EFCAB11-209ENST00000556005 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
EFCAB11-209ENST00000556005 KIF1BPQ96EK5 621 aa12.43□□□□□ -0.42
EFCAB11-209ENST00000556005 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
EFCAB11-209ENST00000556005 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
EFCAB11-209ENST00000556005 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
EFCAB11-209ENST00000556005 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
EFCAB11-209ENST00000556005 NEURL1BA8MQ27 555 aa12.42□□□□□ -0.42
EFCAB11-209ENST00000556005 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
EFCAB11-209ENST00000556005 MYD88Q99836 296 aa12.42□□□□□ -0.42
EFCAB11-209ENST00000556005 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
EFCAB11-209ENST00000556005 GCKRQ14397 625 aa12.41□□□□□ -0.42
EFCAB11-209ENST00000556005 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
EFCAB11-209ENST00000556005 AOX1Q06278 1338 aa12.41□□□□□ -0.42
EFCAB11-209ENST00000556005 TOM1O60784 492 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 MYT1Q01538 1121 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 NBR1Q14596 966 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 SUCLG2Q96I99 432 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 EXOC5O00471 708 aa12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
EFCAB11-209ENST00000556005 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
EFCAB11-209ENST00000556005 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-209ENST00000556005 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-209ENST00000556005 DISP2A7MBM2 1401 aa12.39□□□□□ -0.43
EFCAB11-209ENST00000556005 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
EFCAB11-209ENST00000556005 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
EFCAB11-209ENST00000556005 REC8O95072 547 aa12.38□□□□□ -0.43
EFCAB11-209ENST00000556005 NBPF14Q5TI25 921 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms