RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 RIPOR2Q9Y4F9 1068 aa12.4□□□□□ -0.42
EFCAB11-208ENST00000555872 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 COQ9O75208 318 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 SLFN14P0C7P3 912 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 ITPRIPQ8IWB1 547 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 TTC12Q9H892 705 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 RGL2O15211 777 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 SLC26A8Q96RN1 970 aa12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-208ENST00000555872 NHSL1Q5SYE7 1610 aa12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 PPP1R12AO14974 1030 aaPredicted RBP12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 IDI1Q13907 227 aa12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 CYP2E1P05181 493 aaPredicted RBP12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 PAX7P23759 505 aa12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 NME8Q8N427 588 aa12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 MYO3AQ8NEV4 1616 aa12.38□□□□□ -0.43
EFCAB11-208ENST00000555872 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
EFCAB11-208ENST00000555872 C3P01024 1663 aa12.37□□□□□ -0.43
EFCAB11-208ENST00000555872 GABPB1Q06547 395 aaPredicted RBP12.37□□□□□ -0.43
EFCAB11-208ENST00000555872 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
EFCAB11-208ENST00000555872 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
EFCAB11-208ENST00000555872 NUCB1Q02818 461 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 CXorf56Q9H5V9 222 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 NRDCO43847 1150 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 BMP2KLQ5H9B9 411 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
EFCAB11-208ENST00000555872 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 PROM2Q8N271 834 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 SDR16C5Q8N3Y7 309 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 FEZ1Q99689 392 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 PAIP2Q9BPZ3 127 aaKnown RBP12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 TSPY26PQ9H489 355 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 JMYQ8N9B5 988 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 DDX19BQ9UMR2 479 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
EFCAB11-208ENST00000555872 TRIM27P14373 513 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 PPP2R5AQ15172 486 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 C11orf91Q3C1V1 193 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 ZGPATQ8N5A5 531 aaKnown RBP12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 SETDB1Q15047 1291 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 GET4Q7L5D6 327 aaPredicted RBP12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 ADGRB1O14514 1584 aa12.34□□□□□ -0.43
EFCAB11-208ENST00000555872 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 INHBEP58166 350 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 MICALL1Q8N3F8 863 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 MSL3Q8N5Y2 521 aaKnown RBP12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 EVI5LQ96CN4 794 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 USP25Q9UHP3 1055 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 DIAPH3Q9NSV4 1193 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 SPTLC3Q9NUV7 552 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.44
EFCAB11-208ENST00000555872 GYS2P54840 703 aa12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 FOXD4Q12950 439 aaPredicted RBP12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 TNRQ92752 1358 aa12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 SLC34A2O95436 690 aa12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 ANKRD45Q5TZF3 282 aa12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 WDR63Q8IWG1 891 aa12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 MKL1Q969V6 931 aa12.32□□□□□ -0.44
EFCAB11-208ENST00000555872 IPO7O95373 1038 aaKnown RBP12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 RABEP1Q15276 862 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 MFSD4BQ5TF39 518 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.444e-6■■□□□ 12.7
EFCAB11-208ENST00000555872 RUNDC1Q96C34 613 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 CTAGE5O15320 804 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 MBD3O95983 291 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 SWT1Q5T5J6 900 aaKnown RBP12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 ADCY5O95622 1261 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 RHBDL3P58872 404 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
EFCAB11-208ENST00000555872 CAND2O75155 1236 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 ERICH4A6NGS2 130 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 RASSF4Q9H2L5 321 aa12.3□□□□□ -0.44
EFCAB11-208ENST00000555872 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms