RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-203ENST00000553391 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
MTHFD1-203ENST00000553391 IBTKQ9P2D0 1353 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-203ENST00000553391 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 DDX58O95786 925 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 NBPF7P0C2Y1 421 aaPredicted RBP11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 PPP1R42Q7Z4L9 355 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 LINS1Q8NG48 757 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 UPF2Q9HAU5 1272 aaKnown RBP11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 STRN4Q9NRL3 753 aa11.65□□□□□ -0.54
MTHFD1-203ENST00000553391 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 MRC1P22897 1456 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 UTYO14607 1347 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 RAB11FIP3O75154 756 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 MTX1Q13505 466 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 OTUD7AQ8TE49 926 aaPredicted RBP11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 C22orf23Q9BZE7 217 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 HDAC5Q9UQL6 1122 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
MTHFD1-203ENST00000553391 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-203ENST00000553391 DDX54Q8TDD1 881 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-203ENST00000553391 XAGE3Q8WTP9 111 aa11.63□□□□□ -0.55
MTHFD1-203ENST00000553391 METTL22Q9BUU2 404 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-203ENST00000553391 STAP2Q9UGK3 403 aa11.63□□□□□ -0.55
MTHFD1-203ENST00000553391 SALL3Q9BXA9 1300 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 IGKV5-2P06315 115 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 EXOC6BQ9Y2D4 811 aa11.62□□□□□ -0.55
MTHFD1-203ENST00000553391 ERBB4Q15303 1308 aa11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 PKD1L3Q7Z443 1732 aa11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 EIF5BO60841 1220 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 CDC45O75419 566 aa11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 RBM25P49756 843 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 PDE1AP54750 535 aa11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 MFAP1P55081 439 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 AIMP1Q12904 312 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
MTHFD1-203ENST00000553391 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 APBB1O00213 710 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 SURF6O75683 361 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 MYL6BP14649 208 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 SDSP20132 328 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 CWF19L2Q2TBE0 894 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 NBPF15Q8N660 670 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
MTHFD1-203ENST00000553391 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
MTHFD1-203ENST00000553391 GRM8O00222 908 aa11.59□□□□□ -0.55
MTHFD1-203ENST00000553391 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
MTHFD1-203ENST00000553391 HSP90AB4PQ58FF6 505 aa11.59□□□□□ -0.55
MTHFD1-203ENST00000553391 RHPN1Q8TCX5 695 aa11.59□□□□□ -0.55
MTHFD1-203ENST00000553391 AHDC1Q5TGY3 1603 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 EXOC5O00471 708 aa11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 GCKRQ14397 625 aa11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 BECN1Q14457 450 aa11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 SUCLG2Q96I99 432 aa11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 DAXXQ9UER7 740 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 DISP2A7MBM2 1401 aa11.58□□□□□ -0.56
MTHFD1-203ENST00000553391 A1BGP04217 495 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 PIGBQ92521 554 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 KIF1BPQ96EK5 621 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 MYD88Q99836 296 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 ATG3Q9NT62 314 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 AOX1Q06278 1338 aa11.57□□□□□ -0.56
MTHFD1-203ENST00000553391 VIRMAQ69YN4 1812 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 H7C1W4 665 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 TOM1O60784 492 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 MX1P20591 662 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 SNX21Q969T3 373 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 KIF2CQ99661 725 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 USP26Q9BXU7 913 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 TMOD3Q9NYL9 352 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
MTHFD1-203ENST00000553391 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
MTHFD1-203ENST00000553391 TNS2Q63HR2 1409 aa11.55□□□□□ -0.56
MTHFD1-203ENST00000553391 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-203ENST00000553391 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
MTHFD1-203ENST00000553391 CASP7P55210 303 aa11.55□□□□□ -0.56
MTHFD1-203ENST00000553391 THRAP3Q9Y2W1 955 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-203ENST00000553391 COL15A1P39059 1388 aa11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 PTCD1O75127 700 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-203ENST00000553391 EPHA10Q5JZY3 1008 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms