RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
MMP19-209ENST00000552872 TRIM37O94972 964 aa12.97□□□□□ -0.33
MMP19-209ENST00000552872 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
MMP19-209ENST00000552872 CLUAP1Q96AJ1 413 aa12.97□□□□□ -0.33
MMP19-209ENST00000552872 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
MMP19-209ENST00000552872 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
MMP19-209ENST00000552872 C5P01031 1676 aa12.97□□□□□ -0.33
MMP19-209ENST00000552872 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.33
MMP19-209ENST00000552872 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
MMP19-209ENST00000552872 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 USP16Q9Y5T5 823 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 MRC1P22897 1456 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 BCL9O00512 1426 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 UTRNP46939 3433 aa12.95□□□□□ -0.34
MMP19-209ENST00000552872 G2E3Q7L622 706 aa12.94□□□□□ -0.34
MMP19-209ENST00000552872 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
MMP19-209ENST00000552872 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
MMP19-209ENST00000552872 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
MMP19-209ENST00000552872 MYL6BP14649 208 aa12.94□□□□□ -0.34
MMP19-209ENST00000552872 SBF2Q86WG5 1849 aa12.94□□□□□ -0.34
MMP19-209ENST00000552872 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
MMP19-209ENST00000552872 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
MMP19-209ENST00000552872 RBM10P98175 930 aaKnown RBP12.93□□□□□ -0.34
MMP19-209ENST00000552872 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
MMP19-209ENST00000552872 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
MMP19-209ENST00000552872 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
MMP19-209ENST00000552872 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
MMP19-209ENST00000552872 BTAF1O14981 1849 aa12.92□□□□□ -0.34
MMP19-209ENST00000552872 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
MMP19-209ENST00000552872 DNAJC10Q8IXB1 793 aa12.92□□□□□ -0.34
MMP19-209ENST00000552872 PANK1Q8TE04 598 aa12.92□□□□□ -0.34
MMP19-209ENST00000552872 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
MMP19-209ENST00000552872 A1BGP04217 495 aa12.92□□□□□ -0.34
MMP19-209ENST00000552872 FMNL2Q96PY5 1086 aa12.92□□□□□ -0.34
MMP19-209ENST00000552872 PDE4AP27815 886 aa12.91□□□□□ -0.34
MMP19-209ENST00000552872 FAM43AQ8N2R8 423 aa12.91□□□□□ -0.34
MMP19-209ENST00000552872 MS4A1P11836 297 aa12.91□□□□□ -0.34
MMP19-209ENST00000552872 RLBP1P12271 317 aa12.91□□□□□ -0.34
MMP19-209ENST00000552872 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
MMP19-209ENST00000552872 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
MMP19-209ENST00000552872 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
MMP19-209ENST00000552872 UBR2Q8IWV8 1755 aa12.9□□□□□ -0.34
MMP19-209ENST00000552872 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
MMP19-209ENST00000552872 PAPPAQ13219 1627 aa12.9□□□□□ -0.34
MMP19-209ENST00000552872 F6X3S4 739 aa12.89□□□□□ -0.35
MMP19-209ENST00000552872 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
MMP19-209ENST00000552872 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
MMP19-209ENST00000552872 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
MMP19-209ENST00000552872 ITPK1Q13572 414 aa12.89□□□□□ -0.35
MMP19-209ENST00000552872 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
MMP19-209ENST00000552872 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
MMP19-209ENST00000552872 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
MMP19-209ENST00000552872 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
MMP19-209ENST00000552872 LOC102724428A0A0B4J2F2 783 aa12.88□□□□□ -0.35
MMP19-209ENST00000552872 SIK1P57059 783 aa12.88□□□□□ -0.35
MMP19-209ENST00000552872 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
MMP19-209ENST00000552872 EXOC6Q8TAG9 804 aa12.88□□□□□ -0.35
MMP19-209ENST00000552872 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
MMP19-209ENST00000552872 TRIM27P14373 513 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 NFKBIBQ15653 356 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 NBPF10Q6P3W6 841 aaKnown RBP12.87□□□□□ -0.35
MMP19-209ENST00000552872 NBPF15Q8N660 670 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
MMP19-209ENST00000552872 PDIA6Q15084 440 aa12.86□□□□□ -0.35
MMP19-209ENST00000552872 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
MMP19-209ENST00000552872 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
MMP19-209ENST00000552872 APBA3O96018 575 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
MMP19-209ENST00000552872 FLIIQ13045 1269 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
MMP19-209ENST00000552872 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
MMP19-209ENST00000552872 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
MMP19-209ENST00000552872 TJP1Q07157 1748 aa12.84□□□□□ -0.35
MMP19-209ENST00000552872 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
MMP19-209ENST00000552872 TTLL7Q6ZT98 887 aa12.84□□□□□ -0.35
MMP19-209ENST00000552872 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
MMP19-209ENST00000552872 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
MMP19-209ENST00000552872 XAGE3Q8WTP9 111 aa12.84□□□□□ -0.35
MMP19-209ENST00000552872 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
MMP19-209ENST00000552872 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
MMP19-209ENST00000552872 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
MMP19-209ENST00000552872 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
MMP19-209ENST00000552872 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
MMP19-209ENST00000552872 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
MMP19-209ENST00000552872 PROM2Q8N271 834 aa12.83□□□□□ -0.36
MMP19-209ENST00000552872 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.36
MMP19-209ENST00000552872 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms