RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 KSR2Q6VAB6 950 aa26.02■■□□□ 1.76
RITA1-201ENST00000548278 SMARCA5O60264 1052 aaPredicted RBP26.02■■□□□ 1.76
RITA1-201ENST00000548278 EVA1CP58658 441 aa26.02■■□□□ 1.76
RITA1-201ENST00000548278 APBB1O00213 710 aa26■■□□□ 1.75
RITA1-201ENST00000548278 TTC5Q8N0Z6 440 aa26■■□□□ 1.75
RITA1-201ENST00000548278 MAP3K2Q9Y2U5 619 aa26■■□□□ 1.75
RITA1-201ENST00000548278 SHANK3Q9BYB0 1731 aa26■■□□□ 1.75
RITA1-201ENST00000548278 AHDC1Q5TGY3 1603 aaPredicted RBP26■■□□□ 1.75
RITA1-201ENST00000548278 LTBP4Q8N2S1 1624 aa26■■□□□ 1.75
RITA1-201ENST00000548278 OTUD7AQ8TE49 926 aaPredicted RBP26■■□□□ 1.75
RITA1-201ENST00000548278 GSPT1P15170 499 aaKnown RBP25.99■■□□□ 1.75
RITA1-201ENST00000548278 MFAP1P55081 439 aaKnown RBP25.99■■□□□ 1.75
RITA1-201ENST00000548278 NKX1-1Q15270 411 aaPredicted RBP25.99■■□□□ 1.75
RITA1-201ENST00000548278 SNRPA1P09661 255 aaKnown RBP25.99■■□□□ 1.75
RITA1-201ENST00000548278 NBPF7P0C2Y1 421 aaPredicted RBP25.98■■□□□ 1.75
RITA1-201ENST00000548278 SLC4A3P48751 1232 aa25.98■■□□□ 1.75
RITA1-201ENST00000548278 TTC22Q5TAA0 569 aa25.98■■□□□ 1.75
RITA1-201ENST00000548278 FMNL2Q96PY5 1086 aa25.98■■□□□ 1.75
RITA1-201ENST00000548278 EXOC6BQ9Y2D4 811 aa25.98■■□□□ 1.75
RITA1-201ENST00000548278 ALDH1L1O75891 902 aa25.97■■□□□ 1.75
RITA1-201ENST00000548278 SSH3Q8TE77 659 aa25.97■■□□□ 1.75
RITA1-201ENST00000548278 GLI3P10071 1580 aa25.97■■□□□ 1.75
RITA1-201ENST00000548278 ERVV-2B6SEH9 535 aa25.96■■□□□ 1.75
RITA1-201ENST00000548278 IBTKQ9P2D0 1353 aaPredicted RBP25.96■■□□□ 1.75
RITA1-201ENST00000548278 C22orf23Q9BZE7 217 aa25.95■■□□□ 1.75
RITA1-201ENST00000548278 DAXXQ9UER7 740 aaPredicted RBP25.95■■□□□ 1.75
RITA1-201ENST00000548278 COL22A1Q8NFW1 1626 aaPredicted RBP25.95■■□□□ 1.75
RITA1-201ENST00000548278 DDX58O95786 925 aaKnown RBP25.95■■□□□ 1.74
RITA1-201ENST00000548278 BCL11AQ9H165 835 aa25.95■■□□□ 1.74
RITA1-201ENST00000548278 USP16Q9Y5T5 823 aa25.95■■□□□ 1.74
RITA1-201ENST00000548278 POLA2Q14181 598 aa25.94■■□□□ 1.74
RITA1-201ENST00000548278 TBC1D9Q6ZT07 1266 aa25.94■■□□□ 1.74
RITA1-201ENST00000548278 BTG4Q9NY30 223 aa25.94■■□□□ 1.74
RITA1-201ENST00000548278 PPP1R42Q7Z4L9 355 aa25.94■■□□□ 1.74
RITA1-201ENST00000548278 COL14A1Q05707 1796 aaKnown RBP25.94■■□□□ 1.74
RITA1-201ENST00000548278 LRP10Q7Z4F1 713 aa25.93■■□□□ 1.74
RITA1-201ENST00000548278 LRRCC1Q9C099 1032 aa25.93■■□□□ 1.74
RITA1-201ENST00000548278 AIMP1Q12904 312 aaKnown RBP25.92■■□□□ 1.74
RITA1-201ENST00000548278 LINS1Q8NG48 757 aa25.92■■□□□ 1.74
RITA1-201ENST00000548278 DDX54Q8TDD1 881 aaKnown RBP25.92■■□□□ 1.74
RITA1-201ENST00000548278 LAMB4A4D0S4 1761 aa25.91■■□□□ 1.74
RITA1-201ENST00000548278 UBR2Q8IWV8 1755 aa25.91■■□□□ 1.74
RITA1-201ENST00000548278 CDC45O75419 566 aa25.91■■□□□ 1.74
RITA1-201ENST00000548278 MYL6BP14649 208 aa25.91■■□□□ 1.74
RITA1-201ENST00000548278 OSBPL3Q9H4L5 887 aa25.91■■□□□ 1.74
RITA1-201ENST00000548278 XAGE3Q8WTP9 111 aa25.91■■□□□ 1.74
RITA1-201ENST00000548278 CWF19L2Q2TBE0 894 aaKnown RBP25.9■■□□□ 1.74
RITA1-201ENST00000548278 PAPPAQ13219 1627 aa25.9■■□□□ 1.74
RITA1-201ENST00000548278 COL16A1Q07092 1604 aaPredicted RBP25.89■■□□□ 1.74
RITA1-201ENST00000548278 SALL3Q9BXA9 1300 aa25.89■■□□□ 1.74
RITA1-201ENST00000548278 COPS6Q7L5N1 327 aa25.89■■□□□ 1.73
RITA1-201ENST00000548278 C9orf78Q9NZ63 289 aaPredicted RBP25.89■■□□□ 1.73
RITA1-201ENST00000548278 USP35Q9P2H5 1018 aa25.89■■□□□ 1.73
RITA1-201ENST00000548278 SRGAP3O43295 1099 aa25.88■■□□□ 1.73
RITA1-201ENST00000548278 PDE1AP54750 535 aa25.88■■□□□ 1.73
RITA1-201ENST00000548278 RIC3Q7Z5B4 369 aa25.87■■□□□ 1.73
RITA1-201ENST00000548278 UTYO14607 1347 aa25.87■■□□□ 1.73
RITA1-201ENST00000548278 KCPQ6ZWJ8 1503 aa25.87■■□□□ 1.73
RITA1-201ENST00000548278 RBM25P49756 843 aaKnown RBP25.87■■□□□ 1.73
RITA1-201ENST00000548278 MTX1Q13505 466 aa25.87■■□□□ 1.73
RITA1-201ENST00000548278 BECN1Q14457 450 aa25.87■■□□□ 1.73
RITA1-201ENST00000548278 TOGARAM1Q9Y4F4 1720 aa25.86■■□□□ 1.73
RITA1-201ENST00000548278 IGKV5-2P06315 115 aa25.86■■□□□ 1.73
RITA1-201ENST00000548278 RAB11FIP3O75154 756 aa25.86■■□□□ 1.73
RITA1-201ENST00000548278 SDSP20132 328 aa25.86■■□□□ 1.73
RITA1-201ENST00000548278 DISP2A7MBM2 1401 aa25.85■■□□□ 1.73
RITA1-201ENST00000548278 GRM8O00222 908 aa25.85■■□□□ 1.73
RITA1-201ENST00000548278 HDAC5Q9UQL6 1122 aa25.85■■□□□ 1.73
RITA1-201ENST00000548278 TNS2Q63HR2 1409 aa25.85■■□□□ 1.73
RITA1-201ENST00000548278 SURF6O75683 361 aaKnown RBP25.84■■□□□ 1.73
RITA1-201ENST00000548278 PIP4K2AP48426 406 aaPredicted RBP25.84■■□□□ 1.73
RITA1-201ENST00000548278 METTL22Q9BUU2 404 aaPredicted RBP25.84■■□□□ 1.73
RITA1-201ENST00000548278 ERBB4Q15303 1308 aa25.83■■□□□ 1.73
RITA1-201ENST00000548278 ANKRD13DQ6ZTN6 518 aa25.83■■□□□ 1.73
RITA1-201ENST00000548278 NEURL1BA8MQ27 555 aa25.82■■□□□ 1.72
RITA1-201ENST00000548278 MX1P20591 662 aa25.82■■□□□ 1.72
RITA1-201ENST00000548278 NEXNQ0ZGT2 675 aa25.82■■□□□ 1.72
RITA1-201ENST00000548278 STAP2Q9UGK3 403 aa25.82■■□□□ 1.72
RITA1-201ENST00000548278 TUBGCP6Q96RT7 1819 aa25.82■■□□□ 1.72
RITA1-201ENST00000548278 KAZALD1Q96I82 304 aa25.81■■□□□ 1.72
RITA1-201ENST00000548278 TBC1D2Q9BYX2 928 aa25.81■■□□□ 1.72
RITA1-201ENST00000548278 PHLPP1O60346 1717 aa25.81■■□□□ 1.72
RITA1-201ENST00000548278 NBPF26B4DH59 902 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 NBPF14Q5TI25 921 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 NBPF10Q6P3W6 841 aaKnown RBP25.8■■□□□ 1.72
RITA1-201ENST00000548278 NBPF15Q8N660 670 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 RHPN1Q8TCX5 695 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 SUCLG2Q96I99 432 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 MYD88Q99836 296 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 PLCH1Q4KWH8 1693 aa25.8■■□□□ 1.72
RITA1-201ENST00000548278 EIF5BO60841 1220 aaKnown RBP25.79■■□□□ 1.72
RITA1-201ENST00000548278 ARFGEF2Q9Y6D5 1785 aa25.79■■□□□ 1.72
RITA1-201ENST00000548278 GCKRQ14397 625 aa25.79■■□□□ 1.72
RITA1-201ENST00000548278 KIF1BPQ96EK5 621 aa25.79■■□□□ 1.72
RITA1-201ENST00000548278 IL1RAPL2Q9NP60 686 aa25.79■■□□□ 1.72
RITA1-201ENST00000548278 HSP90AB4PQ58FF6 505 aa25.78■■□□□ 1.72
RITA1-201ENST00000548278 TSHZ3Q63HK5 1081 aa25.78■■□□□ 1.72
RITA1-201ENST00000548278 TMOD3Q9NYL9 352 aa25.78■■□□□ 1.72
RITA1-201ENST00000548278 PTCD1O75127 700 aaKnown RBP25.78■■□□□ 1.72
RITA1-201ENST00000548278 NBR1Q14596 966 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms