RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ADGRF5Q8IZF2 1346 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 TSPOAP1O95153 1857 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
PTCH1-212ENST00000546744 CENPHQ9H3R5 247 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-212ENST00000546744 A6NNZ2 444 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 TUBB8Q3ZCM7 444 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 CCDC91Q7Z6B0 441 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
PTCH1-212ENST00000546744 YEATS2Q9ULM3 1422 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 NAA15Q9BXJ9 866 aaKnown RBP14.9□□□□□ -0.02
PTCH1-212ENST00000546744 STX6O43752 255 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 PAFAH1B1P43034 410 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 KIAA1328Q86T90 577 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 FAM177A1Q8N128 213 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-212ENST00000546744 GGNBP2Q9H3C7 697 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 RRAGDQ9NQL2 400 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-212ENST00000546744 TBC1D2BQ9UPU7 963 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 TAF4BQ92750 862 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 KIF1BPQ96EK5 621 aa14.9□□□□□ -0.02
PTCH1-212ENST00000546744 WASHC4Q2M389 1173 aa14.89□□□□□ -0.03
PTCH1-212ENST00000546744 ARHGAP45Q92619 1136 aa14.89□□□□□ -0.03
PTCH1-212ENST00000546744 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
PTCH1-212ENST00000546744 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
PTCH1-212ENST00000546744 ZNF445P59923 1031 aa14.89□□□□□ -0.03
PTCH1-212ENST00000546744 BCL11BQ9C0K0 894 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-212ENST00000546744 LRRFIP2Q9Y608 721 aaKnown RBP14.89□□□□□ -0.03
PTCH1-212ENST00000546744 C1orf115Q9H7X2 142 aa14.89□□□□□ -0.03
PTCH1-212ENST00000546744 TBC1D9Q6ZT07 1266 aa14.89□□□□□ -0.03
PTCH1-212ENST00000546744 INTS4Q96HW7 963 aaKnown RBP14.89□□□□□ -0.03
PTCH1-212ENST00000546744 ZSCAN16Q9H4T2 348 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-212ENST00000546744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 NF2P35240 595 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 NSD2O96028 1365 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 UHRF1BP1Q6BDS2 1440 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 EZRP15311 586 aaKnown RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 UNC13BO14795 1591 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 NOS1P29475 1434 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 ATP10AO60312 1499 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 HMOX1P09601 288 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 BRPF1P55201 1214 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 CKAP4Q07065 602 aaKnown RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 TTC31Q49AM3 519 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 GIGYF2Q6Y7W6 1299 aaKnown RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 ERO1AQ96HE7 468 aa14.88□□□□□ -0.03
PTCH1-212ENST00000546744 ZNF330Q9Y3S2 320 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-212ENST00000546744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-212ENST00000546744 NFE2L2Q16236 605 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 ZSCAN25Q6NSZ9 544 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 USO1O60763 962 aaKnown RBP14.87□□□□□ -0.03
PTCH1-212ENST00000546744 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 CASTP20810 708 aaKnown RBP14.87□□□□□ -0.03
PTCH1-212ENST00000546744 SPECC1LQ69YQ0 1117 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
PTCH1-212ENST00000546744 PLCD4Q9BRC7 762 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTCH1-212ENST00000546744 IQGAP3Q86VI3 1631 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 FOSBP53539 338 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 CEBPZQ03701 1054 aaKnown RBP14.87□□□□□ -0.03
PTCH1-212ENST00000546744 SPA17Q15506 151 aa14.87□□□□□ -0.03
PTCH1-212ENST00000546744 A0A1B0GUL7 405 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 HCLS1P14317 486 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-212ENST00000546744 UTP14CQ5TAP6 766 aaKnown RBP14.86□□□□□ -0.03
PTCH1-212ENST00000546744 CFAP65Q6ZU64 1925 aaKnown RBP14.86□□□□□ -0.03
PTCH1-212ENST00000546744 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 CEP112Q8N8E3 955 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 GPATCH11Q8N954 259 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 PHAXQ9H814 394 aaKnown RBP14.86□□□□□ -0.03
PTCH1-212ENST00000546744 TUBB2AQ13885 445 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 SSH1Q8WYL5 1049 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
PTCH1-212ENST00000546744 TUBB2BQ9BVA1 445 aa14.86□□□□□ -0.03
PTCH1-212ENST00000546744 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
PTCH1-212ENST00000546744 NUCB1Q02818 461 aa14.85□□□□□ -0.03
PTCH1-212ENST00000546744 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-212ENST00000546744 SEPT7Q16181 437 aaKnown RBP14.85□□□□□ -0.03
PTCH1-212ENST00000546744 CCDC175P0C221 793 aa14.85□□□□□ -0.03
PTCH1-212ENST00000546744 ZSCAN22P10073 491 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-212ENST00000546744 PLA2R1Q13018 1463 aa14.85□□□□□ -0.03
PTCH1-212ENST00000546744 SKILP12757 684 aa14.85□□□□□ -0.03
PTCH1-212ENST00000546744 EBAG9O00559 213 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 VPS53Q5VIR6 699 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 PTPRCP08575 1304 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 KANK3Q6NY19 840 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 NEUROD6Q96NK8 337 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 OPA1O60313 960 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 YEATS4O95619 227 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 HSPA4P34932 840 aa14.84□□□□□ -0.03
PTCH1-212ENST00000546744 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-212ENST00000546744 CCDC57Q2TAC2 916 aa14.83□□□□□ -0.03
PTCH1-212ENST00000546744 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.03
PTCH1-212ENST00000546744 GCOM1H8Y6P7 765 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-212ENST00000546744 SLC3A2P08195 630 aaKnown RBP14.83□□□□□ -0.04
PTCH1-212ENST00000546744 MYZAPP0CAP1 466 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms