RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	RGPD5	Q99666	1765 aa		14.09	□□□□□ -0.15
LDHA-222	ENST00000543695	NCAPD2	Q15021	1401 aa		14.09	□□□□□ -0.15
LDHA-222	ENST00000543695	GNAT3	A8MTJ3	354 aa		14.09	□□□□□ -0.15
LDHA-222	ENST00000543695	SIPA1L3	O60292	1781 aa	Predicted RBP	14.09	□□□□□ -0.15
LDHA-222	ENST00000543695	LRP5	O75197	1615 aa		14.08	□□□□□ -0.15
LDHA-222	ENST00000543695	BECN1	Q14457	450 aa		14.08	□□□□□ -0.16
LDHA-222	ENST00000543695	NBR1	Q14596	966 aa		14.08	□□□□□ -0.16
LDHA-222	ENST00000543695	ATP10D	Q9P241	1426 aa		14.07	□□□□□ -0.16
LDHA-222	ENST00000543695	PXDNL	A1KZ92	1463 aa		14.07	□□□□□ -0.16
LDHA-222	ENST00000543695	KRT24	Q2M2I5	525 aa		14.07	□□□□□ -0.16
LDHA-222	ENST00000543695	ANO8	Q9HCE9	1232 aa	Predicted RBP	14.07	□□□□□ -0.16
LDHA-222	ENST00000543695	STK32B	Q9NY57	414 aa		14.07	□□□□□ -0.16
LDHA-222	ENST00000543695	PPP1R1B	Q9UD71	204 aa	Predicted RBP	14.07	□□□□□ -0.16
LDHA-222	ENST00000543695	SIRT2	Q8IXJ6	389 aa		14.06	□□□□□ -0.16
LDHA-222	ENST00000543695	RPAP2	Q8IXW5	612 aa	Predicted RBP	14.06	□□□□□ -0.16
LDHA-222	ENST00000543695	ANKRD44	Q8N8A2	993 aa		14.06	□□□□□ -0.16
LDHA-222	ENST00000543695	ZCRB1	Q8TBF4	217 aa	Known RBP	14.06	□□□□□ -0.16
LDHA-222	ENST00000543695	ADAMTS7	Q9UKP4	1686 aa		14.06	□□□□□ -0.16
LDHA-222	ENST00000543695	SLC15A2	Q16348	729 aa		14.05	□□□□□ -0.16
LDHA-222	ENST00000543695	BMP2KL	Q5H9B9	411 aa		14.05	□□□□□ -0.16
LDHA-222	ENST00000543695	NBPF6	Q5VWK0	638 aa		14.05	□□□□□ -0.16
LDHA-222	ENST00000543695	NBPF4	Q96M43	638 aa		14.05	□□□□□ -0.16
LDHA-222	ENST00000543695	LNPK	Q9C0E8	428 aa		14.05	□□□□□ -0.16
LDHA-222	ENST00000543695	C1orf115	Q9H7X2	142 aa		14.05	□□□□□ -0.16
LDHA-222	ENST00000543695	CCT4	P50991	539 aa	Known RBP	14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	ANKRD45	Q5TZF3	282 aa		14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	RAPGEF4	Q8WZA2	1011 aa		14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	DCTPP1	Q9H773	170 aa		14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	CEMIP	Q8WUJ3	1361 aa		14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	RREB1	Q92766	1687 aa		14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	TUBGCP6	Q96RT7	1819 aa		14.04	□□□□□ -0.16
LDHA-222	ENST00000543695	SLC4A2	P04920	1241 aa		14.03	□□□□□ -0.16
LDHA-222	ENST00000543695	TAF7	Q15545	349 aa	Predicted RBP	14.03	□□□□□ -0.16
LDHA-222	ENST00000543695	CCDC30	Q5VVM6	783 aa		14.03	□□□□□ -0.16
LDHA-222	ENST00000543695	SYTL4	Q96C24	671 aa	Predicted RBP	14.03	□□□□□ -0.16
LDHA-222	ENST00000543695	STK31	Q9BXU1	1019 aa		14.03	□□□□□ -0.16
LDHA-222	ENST00000543695	SBF2	Q86WG5	1849 aa		14.02	□□□□□ -0.16
LDHA-222	ENST00000543695	NUP188	Q5SRE5	1749 aa		14.02	□□□□□ -0.16
LDHA-222	ENST00000543695	EIF5B	O60841	1220 aa	Known RBP	14.02	□□□□□ -0.17
LDHA-222	ENST00000543695	TAT	P17735	454 aa	Predicted RBP	14.02	□□□□□ -0.17
LDHA-222	ENST00000543695	SLC4A3	P48751	1232 aa		14.02	□□□□□ -0.17
LDHA-222	ENST00000543695	IL17RE	Q8NFR9	667 aa		14.02	□□□□□ -0.17
LDHA-222	ENST00000543695	MIS18A	Q9NYP9	233 aa		14.02	□□□□□ -0.17
LDHA-222	ENST00000543695	SCN11A	Q9UI33	1791 aa		14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	ZBTB7A	O95365	584 aa		14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	PRIM1	P49642	420 aa	Known RBP	14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	CEP85	Q6P2H3	762 aa		14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	USHBP1	Q8N6Y0	703 aa		14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	C22orf23	Q9BZE7	217 aa		14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	WNK3	Q9BYP7	1800 aa		14.01	□□□□□ -0.17
LDHA-222	ENST00000543695	DCAF8L1	A6NGE4	600 aa		14	□□□□□ -0.17
LDHA-222	ENST00000543695	MAPK8IP2	Q13387	824 aa	Predicted RBP	14	□□□□□ -0.17
LDHA-222	ENST00000543695	SLC27A3	Q5K4L6	730 aa		14	□□□□□ -0.17
LDHA-222	ENST00000543695	CHMP4A	Q9BY43	222 aa		14	□□□□□ -0.17
LDHA-222	ENST00000543695	PDGFD	Q9GZP0	370 aa	Predicted RBP	14	□□□□□ -0.17
LDHA-222	ENST00000543695	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	RGPD4	Q7Z3J3	1758 aa		13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	HMMR	O75330	724 aa		13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	HOXB7	P09629	217 aa		13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	MFAP1	P55081	439 aa	Known RBP	13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	AMOT	Q4VCS5	1084 aa		13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	G2E3	Q7L622	706 aa		13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.99	□□□□□ -0.17
LDHA-222	ENST00000543695	RBM25	P49756	843 aa	Known RBP	13.98	□□□□□ -0.17
LDHA-222	ENST00000543695	AKAP4	Q5JQC9	854 aa		13.98	□□□□□ -0.17
LDHA-222	ENST00000543695	MEIS3	Q99687	375 aa		13.98	□□□□□ -0.17
LDHA-222	ENST00000543695	MTFR1L	Q9H019	292 aa		13.98	□□□□□ -0.17
LDHA-222	ENST00000543695	LRRC4B	Q9NT99	713 aa		13.98	□□□□□ -0.17
LDHA-222	ENST00000543695	PLEKHG2	Q9H7P9	1386 aa		13.97	□□□□□ -0.17
LDHA-222	ENST00000543695	DEK	P35659	375 aa	Known RBP	13.97	□□□□□ -0.17
LDHA-222	ENST00000543695	FLII	Q13045	1269 aa		13.97	□□□□□ -0.17
LDHA-222	ENST00000543695	NFKBIB	Q15653	356 aa		13.97	□□□□□ -0.17
LDHA-222	ENST00000543695	MEGF6	O75095	1541 aa		13.96	□□□□□ -0.17
LDHA-222	ENST00000543695	PKD1L3	Q7Z443	1732 aa		13.96	□□□□□ -0.17
LDHA-222	ENST00000543695	KAT6B	Q8WYB5	2073 aa		13.96	□□□□□ -0.17
LDHA-222	ENST00000543695	CDC45	O75419	566 aa		13.96	□□□□□ -0.17
LDHA-222	ENST00000543695	GNAI3	P08754	354 aa		13.96	□□□□□ -0.17
LDHA-222	ENST00000543695	PLEKHM2	Q8IWE5	1019 aa		13.96	□□□□□ -0.17
LDHA-222	ENST00000543695	AK9	Q5TCS8	1911 aa		13.96	□□□□□ -0.18
LDHA-222	ENST00000543695	PCDH11X	Q9BZA7	1347 aa		13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	PCDH11Y	Q9BZA8	1340 aa		13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	NHS	Q6T4R5	1651 aa		13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	GNAI2	P04899	355 aa		13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	HMGB2	P26583	209 aa	Known RBP	13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	PTGER2	P43116	358 aa		13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	TBC1D2	Q9BYX2	928 aa		13.95	□□□□□ -0.18
LDHA-222	ENST00000543695	ZNF827	Q17R98	1081 aa		13.94	□□□□□ -0.18
LDHA-222	ENST00000543695	TTC22	Q5TAA0	569 aa		13.94	□□□□□ -0.18
LDHA-222	ENST00000543695	AKT1S1	Q96B36	256 aa		13.94	□□□□□ -0.18
LDHA-222	ENST00000543695	TFCP2L1	Q9NZI6	479 aa		13.94	□□□□□ -0.18
LDHA-222	ENST00000543695		F6X3S4	739 aa		13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	KCNQ4	P56696	695 aa		13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	EIF4A1	P60842	406 aa	Known RBP	13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	FKBP5	Q13451	457 aa	Predicted RBP	13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	HDGFL1	Q5TGJ6	251 aa		13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	SLC4A10	Q6U841	1118 aa		13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	SLC16A10	Q8TF71	515 aa		13.93	□□□□□ -0.18
LDHA-222	ENST00000543695	CCNL1	Q9UK58	526 aa	Predicted RBP	13.93	□□□□□ -0.18

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