RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
DDX11-225ENST00000543511 NUP188Q5SRE5 1749 aa13.95□□□□□ -0.18
DDX11-225ENST00000543511 TMPOP42166 694 aaKnown RBP13.94□□□□□ -0.18
DDX11-225ENST00000543511 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
DDX11-225ENST00000543511 CCDC125Q86Z20 511 aa13.94□□□□□ -0.18
DDX11-225ENST00000543511 IL17REQ8NFR9 667 aa13.94□□□□□ -0.18
DDX11-225ENST00000543511 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
DDX11-225ENST00000543511 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
DDX11-225ENST00000543511 PDE4AP27815 886 aa13.93□□□□□ -0.18
DDX11-225ENST00000543511 FAM9BQ8IZU0 186 aa13.93□□□□□ -0.18
DDX11-225ENST00000543511 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
DDX11-225ENST00000543511 KDM3BQ7LBC6 1761 aa13.93□□□□□ -0.18
DDX11-225ENST00000543511 TAF1LQ8IZX4 1826 aa13.92□□□□□ -0.18
DDX11-225ENST00000543511 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
DDX11-225ENST00000543511 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
DDX11-225ENST00000543511 PIGBQ92521 554 aa13.92□□□□□ -0.18
DDX11-225ENST00000543511 SYTL4Q96C24 671 aaPredicted RBP13.92□□□□□ -0.18
DDX11-225ENST00000543511 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
DDX11-225ENST00000543511 RRP7AQ9Y3A4 280 aaKnown RBP13.92□□□□□ -0.18
DDX11-225ENST00000543511 CICQ96RK0 1608 aaPredicted RBP13.92□□□□□ -0.18
DDX11-225ENST00000543511 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 APAF1O14727 1248 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 APBA3O96018 575 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 DCTN1Q14203 1278 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 MCM10Q7L590 875 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 DEFB132Q7Z7B7 95 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 TMOD3Q9NYL9 352 aa13.91□□□□□ -0.18
DDX11-225ENST00000543511 SEMA3EO15041 775 aa13.9□□□□□ -0.18
DDX11-225ENST00000543511 RIPK4P57078 832 aa13.9□□□□□ -0.18
DDX11-225ENST00000543511 CABP4P57796 275 aa13.9□□□□□ -0.18
DDX11-225ENST00000543511 MFSD10Q14728 455 aa13.9□□□□□ -0.18
DDX11-225ENST00000543511 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.18
DDX11-225ENST00000543511 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
DDX11-225ENST00000543511 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.19
DDX11-225ENST00000543511 C5P01031 1676 aa13.89□□□□□ -0.19
DDX11-225ENST00000543511 PLSCR1O15162 318 aa13.89□□□□□ -0.19
DDX11-225ENST00000543511 BAG6P46379 1132 aa13.89□□□□□ -0.19
DDX11-225ENST00000543511 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
DDX11-225ENST00000543511 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
DDX11-225ENST00000543511 THUMPD2Q9BTF0 503 aaKnown RBP13.89□□□□□ -0.19
DDX11-225ENST00000543511 COL5A3P25940 1745 aaPredicted RBP13.89□□□□□ -0.19
DDX11-225ENST00000543511 TJP1Q07157 1748 aa13.89□□□□□ -0.19
DDX11-225ENST00000543511 PALLDQ8WX93 1383 aa13.88□□□□□ -0.19
DDX11-225ENST00000543511 TESPA1A2RU30 521 aaPredicted RBP13.88□□□□□ -0.19
DDX11-225ENST00000543511 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
DDX11-225ENST00000543511 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
DDX11-225ENST00000543511 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
DDX11-225ENST00000543511 RTF1Q92541 710 aaKnown RBP13.88□□□□□ -0.19
DDX11-225ENST00000543511 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
DDX11-225ENST00000543511 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
DDX11-225ENST00000543511 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
DDX11-225ENST00000543511 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
DDX11-225ENST00000543511 ATG3Q9NT62 314 aa13.87□□□□□ -0.19
DDX11-225ENST00000543511 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
DDX11-225ENST00000543511 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
DDX11-225ENST00000543511 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
DDX11-225ENST00000543511 TEFQ10587 303 aa13.86□□□□□ -0.19
DDX11-225ENST00000543511 SMARCC1Q92922 1105 aaPredicted RBP13.85□□□□□ -0.19
DDX11-225ENST00000543511 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
DDX11-225ENST00000543511 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
DDX11-225ENST00000543511 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
DDX11-225ENST00000543511 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
DDX11-225ENST00000543511 CCDC27Q2M243 656 aa13.84□□□□□ -0.19
DDX11-225ENST00000543511 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
DDX11-225ENST00000543511 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
DDX11-225ENST00000543511 MYH14Q7Z406 1995 aaKnown RBP13.83□□□□□ -0.19
DDX11-225ENST00000543511 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.2
DDX11-225ENST00000543511 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
DDX11-225ENST00000543511 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
DDX11-225ENST00000543511 LOC102724428A0A0B4J2F2 783 aa13.82□□□□□ -0.2
DDX11-225ENST00000543511 KCNQ3O43525 872 aa13.82□□□□□ -0.2
DDX11-225ENST00000543511 TIE1P35590 1138 aa13.82□□□□□ -0.2
DDX11-225ENST00000543511 SIK1P57059 783 aa13.82□□□□□ -0.2
DDX11-225ENST00000543511 TAF7Q15545 349 aaPredicted RBP13.82□□□□□ -0.2
DDX11-225ENST00000543511 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
DDX11-225ENST00000543511 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
DDX11-225ENST00000543511 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
DDX11-225ENST00000543511 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 KCNQ4P56696 695 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 ZNF790Q6PG37 636 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 CCNL1Q9UK58 526 aaPredicted RBP13.81□□□□□ -0.2
DDX11-225ENST00000543511 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
DDX11-225ENST00000543511 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
DDX11-225ENST00000543511 ITPK1Q13572 414 aa13.8□□□□□ -0.2
DDX11-225ENST00000543511 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
DDX11-225ENST00000543511 CHL1O00533 1208 aa13.79□□□□□ -0.2
DDX11-225ENST00000543511 PTCD1O75127 700 aaKnown RBP13.79□□□□□ -0.2
DDX11-225ENST00000543511 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
DDX11-225ENST00000543511 CAMK2BQ13554 666 aa13.79□□□□□ -0.2
DDX11-225ENST00000543511 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
DDX11-225ENST00000543511 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
DDX11-225ENST00000543511 BABAM1Q9NWV8 329 aa13.79□□□□□ -0.2
DDX11-225ENST00000543511 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
DDX11-225ENST00000543511 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
DDX11-225ENST00000543511 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
DDX11-225ENST00000543511 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms