RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 HSPA4P34932 840 aa20.45■□□□□ 0.86
CACNB3-203ENST00000540990 MTX1Q13505 466 aa20.45■□□□□ 0.86
CACNB3-203ENST00000540990 RHPN1Q8TCX5 695 aa20.45■□□□□ 0.86
CACNB3-203ENST00000540990 KIF1BPQ96EK5 621 aa20.45■□□□□ 0.86
CACNB3-203ENST00000540990 LTV1Q96GA3 475 aaPredicted RBP20.45■□□□□ 0.86
CACNB3-203ENST00000540990 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
CACNB3-203ENST00000540990 AKAP4Q5JQC9 854 aa20.44■□□□□ 0.86
CACNB3-203ENST00000540990 RILPL2Q969X0 211 aa20.44■□□□□ 0.86
CACNB3-203ENST00000540990 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
CACNB3-203ENST00000540990 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
CACNB3-203ENST00000540990 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 GPT2Q8TD30 523 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 SLIT3O75094 1523 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 TRIM44Q96DX7 344 aaPredicted RBP20.43■□□□□ 0.86
CACNB3-203ENST00000540990 CAMTA1Q9Y6Y1 1673 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 HEG1Q9ULI3 1381 aa20.43■□□□□ 0.86
CACNB3-203ENST00000540990 CAVIN1Q6NZI2 390 aaKnown RBP20.42■□□□□ 0.86
CACNB3-203ENST00000540990 LGR6Q9HBX8 967 aa20.42■□□□□ 0.86
CACNB3-203ENST00000540990 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
CACNB3-203ENST00000540990 PRPF40AO75400 957 aaKnown RBP20.41■□□□□ 0.86
CACNB3-203ENST00000540990 SURF6O75683 361 aaKnown RBP20.41■□□□□ 0.86
CACNB3-203ENST00000540990 ADCY9O60503 1353 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 RAD50Q92878 1312 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 SGSM2O43147 1006 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 MBD3O95983 291 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 AMOTQ4VCS5 1084 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 IL1RAPL2Q9NP60 686 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 CHPF2Q9P2E5 772 aa20.41■□□□□ 0.86
CACNB3-203ENST00000540990 HS1BP3Q53T59 392 aa20.4■□□□□ 0.86
CACNB3-203ENST00000540990 TTC41PQ6P2S7 1318 aa20.4■□□□□ 0.86
CACNB3-203ENST00000540990 SRGAP3O43295 1099 aa20.39■□□□□ 0.86
CACNB3-203ENST00000540990 ALDH1L1O75891 902 aa20.39■□□□□ 0.86
CACNB3-203ENST00000540990 NBPF7P0C2Y1 421 aaPredicted RBP20.39■□□□□ 0.86
CACNB3-203ENST00000540990 PLEKHO1Q53GL0 409 aaPredicted RBP20.39■□□□□ 0.86
CACNB3-203ENST00000540990 IL25Q9H293 177 aa20.39■□□□□ 0.86
CACNB3-203ENST00000540990 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.85
CACNB3-203ENST00000540990 NUTM1Q86Y26 1132 aa20.39■□□□□ 0.85
CACNB3-203ENST00000540990 ANP32BQ92688 251 aaKnown RBP20.39■□□□□ 0.85
CACNB3-203ENST00000540990 PDLIM2Q96JY6 352 aa20.39■□□□□ 0.85
CACNB3-203ENST00000540990 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
CACNB3-203ENST00000540990 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
CACNB3-203ENST00000540990 ANKLE2Q86XL3 938 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 CNTROBQ8N137 903 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 LSG1Q9H089 658 aaKnown RBP20.37■□□□□ 0.85
CACNB3-203ENST00000540990 DBF4Q9UBU7 674 aaPredicted RBP20.37■□□□□ 0.85
CACNB3-203ENST00000540990 KCNQ3O43525 872 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
CACNB3-203ENST00000540990 LRSAM1Q6UWE0 723 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 ARHGEF25Q86VW2 580 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 TTC14Q96N46 770 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 RBSNQ9H1K0 784 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 TMEM63CQ9P1W3 806 aa20.37■□□□□ 0.85
CACNB3-203ENST00000540990 RGPD2P0DJD1 1756 aa20.36■□□□□ 0.85
CACNB3-203ENST00000540990 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
CACNB3-203ENST00000540990 RNMTO43148 476 aaKnown RBP20.36■□□□□ 0.85
CACNB3-203ENST00000540990 TEFQ10587 303 aa20.36■□□□□ 0.85
CACNB3-203ENST00000540990 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
CACNB3-203ENST00000540990 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
CACNB3-203ENST00000540990 NCLP19338 710 aaKnown RBP20.35■□□□□ 0.85
CACNB3-203ENST00000540990 PRIM1P49642 420 aaKnown RBP20.35■□□□□ 0.85
CACNB3-203ENST00000540990 C14orf37Q86TY3 774 aa20.35■□□□□ 0.85
CACNB3-203ENST00000540990 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
CACNB3-203ENST00000540990 MST1RQ04912 1400 aa20.35■□□□□ 0.85
CACNB3-203ENST00000540990 PXDNQ92626 1479 aa20.35■□□□□ 0.85
CACNB3-203ENST00000540990 GLRX3O76003 335 aaKnown RBP20.34■□□□□ 0.85
CACNB3-203ENST00000540990 ZSCAN30Q86W11 494 aa20.34■□□□□ 0.85
CACNB3-203ENST00000540990 PSME1Q06323 249 aa20.34■□□□□ 0.85
CACNB3-203ENST00000540990 KCNB2Q92953 911 aa20.34■□□□□ 0.85
CACNB3-203ENST00000540990 SNX14Q9Y5W7 946 aa20.34■□□□□ 0.85
CACNB3-203ENST00000540990 UTYO14607 1347 aa20.34■□□□□ 0.85
CACNB3-203ENST00000540990 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
CACNB3-203ENST00000540990 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.85
CACNB3-203ENST00000540990 TMEM87AQ8NBN3 555 aa20.33■□□□□ 0.85
CACNB3-203ENST00000540990 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.85
CACNB3-203ENST00000540990 KSR2Q6VAB6 950 aa20.32■□□□□ 0.84
CACNB3-203ENST00000540990 ERC1Q8IUD2 1116 aa20.32■□□□□ 0.84
CACNB3-203ENST00000540990 RBM27Q9P2N5 1060 aaKnown RBP20.32■□□□□ 0.84
CACNB3-203ENST00000540990 NSFL1CQ9UNZ2 370 aaKnown RBP20.32■□□□□ 0.84
CACNB3-203ENST00000540990 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
CACNB3-203ENST00000540990 RPAP1Q9BWH6 1393 aaPredicted RBP20.31■□□□□ 0.84
CACNB3-203ENST00000540990 TRPM3Q9HCF6 1732 aaPredicted RBP20.3■□□□□ 0.84
CACNB3-203ENST00000540990 GCP02774 474 aa20.3■□□□□ 0.84
CACNB3-203ENST00000540990 ESCO1Q5FWF5 840 aa20.3■□□□□ 0.84
CACNB3-203ENST00000540990 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
CACNB3-203ENST00000540990 C1orf141Q5JVX7 400 aa20.3■□□□□ 0.84
CACNB3-203ENST00000540990 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
CACNB3-203ENST00000540990 CHAMP1Q96JM3 812 aa20.3■□□□□ 0.84
CACNB3-203ENST00000540990 CLASRPQ8N2M8 674 aaKnown RBP20.29■□□□□ 0.84
CACNB3-203ENST00000540990 RUFY2Q8WXA3 655 aa20.29■□□□□ 0.84
CACNB3-203ENST00000540990 TM6SF1Q9BZW5 370 aa20.29■□□□□ 0.84
CACNB3-203ENST00000540990 ECHDC1Q9NTX5 307 aa20.29■□□□□ 0.84
CACNB3-203ENST00000540990 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
CACNB3-203ENST00000540990 RASEFQ8IZ41 740 aa20.28■□□□□ 0.84
CACNB3-203ENST00000540990 SYAP1Q96A49 352 aaPredicted RBP20.28■□□□□ 0.84
CACNB3-203ENST00000540990 SNRKQ9NRH2 765 aa20.28■□□□□ 0.84
CACNB3-203ENST00000540990 MAP3K2Q9Y2U5 619 aa20.28■□□□□ 0.84
CACNB3-203ENST00000540990 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
CACNB3-203ENST00000540990 LINS1Q8NG48 757 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms