RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 AHDC1Q5TGY3 1603 aaPredicted RBP18.4■□□□□ 0.54
ATL3-203ENST00000538786 PDIA6Q15084 440 aa18.4■□□□□ 0.54
ATL3-203ENST00000538786 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
ATL3-203ENST00000538786 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
ATL3-203ENST00000538786 MAP3K2Q9Y2U5 619 aa18.4■□□□□ 0.54
ATL3-203ENST00000538786 ROBO1Q9Y6N7 1651 aa18.4■□□□□ 0.54
ATL3-203ENST00000538786 ALDH1L1O75891 902 aa18.39■□□□□ 0.53
ATL3-203ENST00000538786 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
ATL3-203ENST00000538786 SNRPA1P09661 255 aaKnown RBP18.39■□□□□ 0.53
ATL3-203ENST00000538786 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.53
ATL3-203ENST00000538786 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
ATL3-203ENST00000538786 DAXXQ9UER7 740 aaPredicted RBP18.38■□□□□ 0.53
ATL3-203ENST00000538786 APBB1O00213 710 aa18.37■□□□□ 0.53
ATL3-203ENST00000538786 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
ATL3-203ENST00000538786 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
ATL3-203ENST00000538786 C5P01031 1676 aa18.37■□□□□ 0.53
ATL3-203ENST00000538786 NBPF7P0C2Y1 421 aaPredicted RBP18.37■□□□□ 0.53
ATL3-203ENST00000538786 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
ATL3-203ENST00000538786 TTC22Q5TAA0 569 aa18.37■□□□□ 0.53
ATL3-203ENST00000538786 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
ATL3-203ENST00000538786 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
ATL3-203ENST00000538786 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
ATL3-203ENST00000538786 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
ATL3-203ENST00000538786 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
ATL3-203ENST00000538786 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
ATL3-203ENST00000538786 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
ATL3-203ENST00000538786 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
ATL3-203ENST00000538786 POLA2Q14181 598 aa18.35■□□□□ 0.53
ATL3-203ENST00000538786 OTUD7AQ8TE49 926 aaPredicted RBP18.35■□□□□ 0.53
ATL3-203ENST00000538786 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
ATL3-203ENST00000538786 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
ATL3-203ENST00000538786 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
ATL3-203ENST00000538786 PPP1R42Q7Z4L9 355 aa18.34■□□□□ 0.53
ATL3-203ENST00000538786 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
ATL3-203ENST00000538786 HDAC5Q9UQL6 1122 aa18.34■□□□□ 0.53
ATL3-203ENST00000538786 CDC45O75419 566 aa18.33■□□□□ 0.53
ATL3-203ENST00000538786 AIMP1Q12904 312 aaKnown RBP18.33■□□□□ 0.53
ATL3-203ENST00000538786 OSBPL3Q9H4L5 887 aa18.33■□□□□ 0.53
ATL3-203ENST00000538786 MYL6BP14649 208 aa18.33■□□□□ 0.52
ATL3-203ENST00000538786 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
ATL3-203ENST00000538786 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
ATL3-203ENST00000538786 C9orf78Q9NZ63 289 aaPredicted RBP18.33■□□□□ 0.52
ATL3-203ENST00000538786 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
ATL3-203ENST00000538786 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
ATL3-203ENST00000538786 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
ATL3-203ENST00000538786 GLI3P10071 1580 aa18.32■□□□□ 0.52
ATL3-203ENST00000538786 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
ATL3-203ENST00000538786 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 MTX1Q13505 466 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 CWF19L2Q2TBE0 894 aaKnown RBP18.31■□□□□ 0.52
ATL3-203ENST00000538786 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 RIC3Q7Z5B4 369 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 UTYO14607 1347 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 SRGAP3O43295 1099 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 RAB11FIP3O75154 756 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 BECN1Q14457 450 aa18.31■□□□□ 0.52
ATL3-203ENST00000538786 ERBB4Q15303 1308 aa18.3■□□□□ 0.52
ATL3-203ENST00000538786 PDE1AP54750 535 aa18.3■□□□□ 0.52
ATL3-203ENST00000538786 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
ATL3-203ENST00000538786 GRM8O00222 908 aa18.29■□□□□ 0.52
ATL3-203ENST00000538786 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
ATL3-203ENST00000538786 NEXNQ0ZGT2 675 aa18.29■□□□□ 0.52
ATL3-203ENST00000538786 DISP2A7MBM2 1401 aa18.29■□□□□ 0.52
ATL3-203ENST00000538786 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
ATL3-203ENST00000538786 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
ATL3-203ENST00000538786 METTL22Q9BUU2 404 aaPredicted RBP18.29■□□□□ 0.52
ATL3-203ENST00000538786 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
ATL3-203ENST00000538786 TNS2Q63HR2 1409 aa18.28■□□□□ 0.52
ATL3-203ENST00000538786 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
ATL3-203ENST00000538786 IGKV5-2P06315 115 aa18.28■□□□□ 0.52
ATL3-203ENST00000538786 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
ATL3-203ENST00000538786 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
ATL3-203ENST00000538786 UBR2Q8IWV8 1755 aa18.27■□□□□ 0.52
ATL3-203ENST00000538786 SDSP20132 328 aa18.27■□□□□ 0.52
ATL3-203ENST00000538786 HSP90AB4PQ58FF6 505 aa18.27■□□□□ 0.52
ATL3-203ENST00000538786 MX1P20591 662 aa18.27■□□□□ 0.51
ATL3-203ENST00000538786 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
ATL3-203ENST00000538786 STAP2Q9UGK3 403 aa18.26■□□□□ 0.51
ATL3-203ENST00000538786 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
ATL3-203ENST00000538786 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
ATL3-203ENST00000538786 KIF1BPQ96EK5 621 aa18.25■□□□□ 0.51
ATL3-203ENST00000538786 PIP4K2AP48426 406 aaPredicted RBP18.25■□□□□ 0.51
ATL3-203ENST00000538786 GCKRQ14397 625 aa18.25■□□□□ 0.51
ATL3-203ENST00000538786 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
ATL3-203ENST00000538786 MYD88Q99836 296 aa18.25■□□□□ 0.51
ATL3-203ENST00000538786 AOX1Q06278 1338 aa18.24■□□□□ 0.51
ATL3-203ENST00000538786 PLBD2Q8NHP8 589 aa18.24■□□□□ 0.51
ATL3-203ENST00000538786 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
ATL3-203ENST00000538786 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
ATL3-203ENST00000538786 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
ATL3-203ENST00000538786 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 KAZALD1Q96I82 304 aa18.23■□□□□ 0.51
ATL3-203ENST00000538786 TOM1O60784 492 aa18.22■□□□□ 0.51
ATL3-203ENST00000538786 TBC1D2Q9BYX2 928 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms