RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CCDC192P0DO97 292 aa22.25■■□□□ 1.15
SFSWAP-207ENST00000538548 AGLP35573 1532 aa22.25■■□□□ 1.15
SFSWAP-207ENST00000538548 TMEM131LA2VDJ0 1609 aa22.25■■□□□ 1.15
SFSWAP-207ENST00000538548 NCBP1Q09161 790 aaKnown RBP22.25■■□□□ 1.15
SFSWAP-207ENST00000538548 TTC14Q96N46 770 aa22.25■■□□□ 1.15
SFSWAP-207ENST00000538548 UNC5CLQ8IV45 518 aa22.24■■□□□ 1.15
SFSWAP-207ENST00000538548 LIMCH1Q9UPQ0 1083 aa22.24■■□□□ 1.15
SFSWAP-207ENST00000538548 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
SFSWAP-207ENST00000538548 F6X3S4 739 aa22.23■■□□□ 1.15
SFSWAP-207ENST00000538548 IL25Q9H293 177 aa22.23■■□□□ 1.15
SFSWAP-207ENST00000538548 SMC3Q9UQE7 1217 aa22.23■■□□□ 1.15
SFSWAP-207ENST00000538548 RAD50Q92878 1312 aa22.23■■□□□ 1.15
SFSWAP-207ENST00000538548 RRS1Q15050 365 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-207ENST00000538548 MCM10Q7L590 875 aa22.22■■□□□ 1.15
SFSWAP-207ENST00000538548 FAM200AQ8TCP9 573 aa22.22■■□□□ 1.15
SFSWAP-207ENST00000538548 COG3Q96JB2 828 aa22.22■■□□□ 1.15
SFSWAP-207ENST00000538548 SMTNL1A8MU46 457 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 AK2P54819 239 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 FGD1P98174 961 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 GABPB1Q06547 395 aaPredicted RBP22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 WAPLQ7Z5K2 1190 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 ZRANB1Q9UGI0 708 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 PTGS1P23219 599 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 ATP8B2P98198 1209 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 G2E3Q7L622 706 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 CTNNA3Q9UI47 895 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 SNX14Q9Y5W7 946 aa22.21■■□□□ 1.15
SFSWAP-207ENST00000538548 GNAI3P08754 354 aa22.2■■□□□ 1.14
SFSWAP-207ENST00000538548 RUFY3Q7L099 469 aa22.2■■□□□ 1.14
SFSWAP-207ENST00000538548 DLC1Q96QB1 1528 aa22.2■■□□□ 1.14
SFSWAP-207ENST00000538548 PNMA6EA0A0J9YXQ4 647 aa22.2■■□□□ 1.14
SFSWAP-207ENST00000538548 AEBP1Q8IUX7 1158 aa22.2■■□□□ 1.14
SFSWAP-207ENST00000538548 ARHGEF10O15013 1369 aa22.2■■□□□ 1.14
SFSWAP-207ENST00000538548 DNM1Q05193 864 aaKnown RBP22.19■■□□□ 1.14
SFSWAP-207ENST00000538548 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
SFSWAP-207ENST00000538548 SULT6B1Q6IMI4 303 aa22.19■■□□□ 1.14
SFSWAP-207ENST00000538548 ZNF771Q7L3S4 317 aaPredicted RBP22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 CGNQ9P2M7 1197 aaKnown RBP22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 IGSF3O75054 1194 aa22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 RTF1Q92541 710 aaKnown RBP22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 MTMR6Q9Y217 621 aa22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 CRB1P82279 1406 aa22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 A2ML1A8K2U0 1454 aa22.18■■□□□ 1.14
SFSWAP-207ENST00000538548 SGSM2O43147 1006 aa22.17■■□□□ 1.14
SFSWAP-207ENST00000538548 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
SFSWAP-207ENST00000538548 DDX41Q9UJV9 622 aaKnown RBP22.17■■□□□ 1.14
SFSWAP-207ENST00000538548 PAXBP1Q9Y5B6 917 aa22.17■■□□□ 1.14
SFSWAP-207ENST00000538548 MAP3K11Q16584 847 aa22.15■■□□□ 1.14
SFSWAP-207ENST00000538548 CCDC186Q7Z3E2 898 aa22.15■■□□□ 1.14
SFSWAP-207ENST00000538548 C16orf45Q96MC5 204 aaPredicted RBP22.15■■□□□ 1.14
SFSWAP-207ENST00000538548 GJB2P29033 226 aa22.15■■□□□ 1.14
SFSWAP-207ENST00000538548 RASEFQ8IZ41 740 aa22.15■■□□□ 1.14
SFSWAP-207ENST00000538548 LSG1Q9H089 658 aaKnown RBP22.15■■□□□ 1.14
SFSWAP-207ENST00000538548 EIF4A2Q14240 407 aaKnown RBP22.14■■□□□ 1.14
SFSWAP-207ENST00000538548 MRVI1Q9Y6F6 885 aa22.14■■□□□ 1.14
SFSWAP-207ENST00000538548 TNNT1P13805 278 aa22.14■■□□□ 1.13
SFSWAP-207ENST00000538548 TYRO3Q06418 890 aa22.14■■□□□ 1.13
SFSWAP-207ENST00000538548 LARP6Q9BRS8 491 aaKnown RBP22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 NUP62CLQ9H1M0 184 aa22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 CCDC112Q8NEF3 446 aa22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 CPS1P31327 1500 aa22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 TNRQ92752 1358 aa22.13■■□□□ 1.13
SFSWAP-207ENST00000538548 LUZP1Q86V48 1076 aa22.12■■□□□ 1.13
SFSWAP-207ENST00000538548 TXNDC2Q86VQ3 553 aa22.12■■□□□ 1.13
SFSWAP-207ENST00000538548 SOS1Q07889 1333 aaPredicted RBP22.12■■□□□ 1.13
SFSWAP-207ENST00000538548 LRMPQ12912 555 aa22.12■■□□□ 1.13
SFSWAP-207ENST00000538548 SPATA31D1Q6ZQQ2 1576 aa22.12■■□□□ 1.13
SFSWAP-207ENST00000538548 LARGE1O95461 756 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 ZSCAN25Q6NSZ9 544 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 CCDC83Q8IWF9 413 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 STK31Q9BXU1 1019 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 SH2B1Q9NRF2 756 aaPredicted RBP22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 MON2Q7Z3U7 1717 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 ZSCAN31Q96LW9 406 aaPredicted RBP22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 MIS18AQ9NYP9 233 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 ELP1O95163 1332 aa22.11■■□□□ 1.13
SFSWAP-207ENST00000538548 CASTP20810 708 aaKnown RBP22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 DRC7Q8IY82 874 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 IL1RAPL2Q9NP60 686 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 LRRFIP2Q9Y608 721 aaKnown RBP22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 SLFN14P0C7P3 912 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 PLA2G4DQ86XP0 818 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 PI4K2BQ8TCG2 481 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 WASLO00401 505 aaPredicted RBP22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 KRT85P78386 507 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 VPS53Q5VIR6 699 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 NUTM1Q86Y26 1132 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 KIF18AQ8NI77 898 aa22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 BBXQ8WY36 941 aaPredicted RBP22.1■■□□□ 1.13
SFSWAP-207ENST00000538548 VPS37CA5D8V6 355 aaPredicted RBP22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 PDIA4P13667 645 aaKnown RBP22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 LTKP29376 864 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 ZNF75DP51815 510 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 FLIIQ13045 1269 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 TTC6Q86TZ1 520 aa22.09■■□□□ 1.13
SFSWAP-207ENST00000538548 SLC26A8Q96RN1 970 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms