RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CDKL5O76039 1030 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 PDCP20941 246 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 ALDH1L2Q3SY69 923 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 SMARCC1Q92922 1105 aaPredicted RBP6.33□□□□□ -1.4
LRP6-203ENST00000538239 ATP10AO60312 1499 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 PI4KAP2A4QPH2 592 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 MCM2P49736 904 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 PI4KAP1Q8N8J0 262 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 SCLT1Q96NL6 688 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 SNRKQ9NRH2 765 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 SMC2O95347 1197 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 SYCP1Q15431 976 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 MYO1BO43795 1136 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 FEZ1Q99689 392 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 RTCBQ9Y3I0 505 aaKnown RBP6.33□□□□□ -1.4
LRP6-203ENST00000538239 CEP170Q5SW79 1584 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 ME1P48163 572 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 AEBP1Q8IUX7 1158 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 TANGO6Q9C0B7 1094 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 RARSP54136 660 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 XAGE3Q8WTP9 111 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 ECM2O94769 699 aaPredicted RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 LARP1BQ659C4 914 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 PRPF40BQ6NWY9 871 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 ANKRD13DQ6ZTN6 518 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 CFAP65Q6ZU64 1925 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 AKAP4Q5JQC9 854 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 ANKRD18AQ8IVF6 992 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 NFATC2IPQ8NCF5 419 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 GOLIM4O00461 696 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 GLRX3O76003 335 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 EIF4A2Q14240 407 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 RBM26Q5T8P6 1007 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 CCDC82Q8N4S0 544 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 IQSEC3Q9UPP2 1182 aaPredicted RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 PIK3R4Q99570 1358 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 KAT6BQ8WYB5 2073 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 NKTRP30414 1462 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 FAM98CQ17RN3 349 aaKnown RBP6.32□□□□□ -1.4
LRP6-203ENST00000538239 PTPRCP08575 1304 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 RNF214Q8ND24 703 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 ABCA5Q8WWZ7 1642 aa6.32□□□□□ -1.4
LRP6-203ENST00000538239 GCP02774 474 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 KRT32Q14532 448 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 JMYQ8N9B5 988 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 PDCL3Q9H2J4 239 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 U3KPZ7 1027 aaPredicted RBP6.31□□□□□ -1.4
LRP6-203ENST00000538239 PTPRKQ15262 1439 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 TNIP1Q15025 636 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 UTP14AQ9BVJ6 771 aaKnown RBP6.31□□□□□ -1.4
LRP6-203ENST00000538239 ZNF213O14771 459 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 RIMBP2O15034 1052 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 FAM13BQ9NYF5 915 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 GNPATO15228 680 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 CAVIN1Q6NZI2 390 aaKnown RBP6.31□□□□□ -1.4
LRP6-203ENST00000538239 ORAI2Q96SN7 254 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 FILIP1LQ4L180 1135 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 WASF1Q92558 559 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 CUL5Q93034 780 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 NLRP3Q96P20 1036 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 ATP7AQ04656 1500 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 VAT1LQ9HCJ6 419 aa6.31□□□□□ -1.4
LRP6-203ENST00000538239 TRPM2O94759 1503 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 PICALMQ13492 652 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 USP21Q9UK80 565 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 GSE1Q14687 1217 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 CCDC144CPQ8IYA2 1237 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 HDAC9Q9UKV0 1011 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 BAG3O95817 575 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 HLA-DOAP06340 250 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 MTHFSDQ2M296 383 aaKnown RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 NYXQ9GZU5 481 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 CABP5Q9NP86 173 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 STK32BQ9NY57 414 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 PCDH11XQ9BZA7 1347 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 PCDH11YQ9BZA8 1340 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 STIM1Q13586 685 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 SPTY2D1Q68D10 685 aaPredicted RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 TRMT1LQ7Z2T5 733 aaKnown RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 IQCA1Q86XH1 822 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 ZFYVE16Q7Z3T8 1539 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 CFAP43Q8NDM7 1665 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 K7ELQ4 463 aaPredicted RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 C20orf194Q5TEA3 1177 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 SLC12A7Q9Y666 1083 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 EIF2AK4Q9P2K8 1649 aaKnown RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 HOXC9P31274 260 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 DHX8Q14562 1220 aaKnown RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 TTF1Q15361 905 aaPredicted RBP6.3□□□□□ -1.4
LRP6-203ENST00000538239 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
LRP6-203ENST00000538239 LDHCP07864 332 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 TRAPPC3LQ5T215 181 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 CTCFLQ8NI51 663 aaPredicted RBP6.29□□□□□ -1.4
LRP6-203ENST00000538239 CAGE1Q8TC20 777 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 VEZTQ9HBM0 779 aa6.29□□□□□ -1.4
LRP6-203ENST00000538239 BMP2KQ9NSY1 1161 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms