RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ZNHIT6Q9NWK9 470 aaKnown RBP12.6□□□□□ -0.39
COLCA1-203ENST00000532918 MINDY4BA8MYZ0 360 aa12.6□□□□□ -0.39
COLCA1-203ENST00000532918 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
COLCA1-203ENST00000532918 HSPA2P54652 639 aa12.6□□□□□ -0.39
COLCA1-203ENST00000532918 PDILTQ8N807 584 aa12.6□□□□□ -0.39
COLCA1-203ENST00000532918 FAM43AQ8N2R8 423 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 CWC27Q6UX04 472 aaKnown RBP12.59□□□□□ -0.39
COLCA1-203ENST00000532918 STK32BQ9NY57 414 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 OGFOD1Q8N543 542 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 TFCP2L1Q9NZI6 479 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
COLCA1-203ENST00000532918 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 TRAF1Q13077 416 aa12.59□□□□□ -0.39
COLCA1-203ENST00000532918 H0YHG0 523 aa12.58□□□□□ -0.39
COLCA1-203ENST00000532918 STK3Q13188 491 aa12.58□□□□□ -0.39
COLCA1-203ENST00000532918 DCTN1Q14203 1278 aa12.58□□□□□ -0.39
COLCA1-203ENST00000532918 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.39
COLCA1-203ENST00000532918 ZNF592Q92610 1267 aa12.58□□□□□ -0.39
COLCA1-203ENST00000532918 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.39
COLCA1-203ENST00000532918 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.39
COLCA1-203ENST00000532918 RUFY1Q96T51 708 aa12.58□□□□□ -0.4
COLCA1-203ENST00000532918 PIK3R4Q99570 1358 aa12.58□□□□□ -0.4
COLCA1-203ENST00000532918 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
COLCA1-203ENST00000532918 ARGLU1Q9NWB6 273 aaPredicted RBP12.58□□□□□ -0.4
COLCA1-203ENST00000532918 ZMYM3Q14202 1370 aa12.58□□□□□ -0.4
COLCA1-203ENST00000532918 WDR33Q9C0J8 1336 aaKnown RBP12.58□□□□□ -0.4
COLCA1-203ENST00000532918 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
COLCA1-203ENST00000532918 RAB34Q9BZG1 259 aa12.58□□□□□ -0.4
COLCA1-203ENST00000532918 CCP110O43303 1012 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 JAKMIP1Q96N16 626 aaKnown RBP12.57□□□□□ -0.4
COLCA1-203ENST00000532918 PPP1R12BO60237 982 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-203ENST00000532918 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 MX1P20591 662 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
COLCA1-203ENST00000532918 PHAXQ9H814 394 aaKnown RBP12.57□□□□□ -0.4
COLCA1-203ENST00000532918 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 TRPM2O94759 1503 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 AKAP4Q5JQC9 854 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 SMC2O95347 1197 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 KRT85P78386 507 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 PDE4BQ07343 736 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
COLCA1-203ENST00000532918 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
COLCA1-203ENST00000532918 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
COLCA1-203ENST00000532918 ME1P48163 572 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
COLCA1-203ENST00000532918 FLIIQ13045 1269 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 CCDC178Q5BJE1 867 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 EYA3Q99504 573 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 ABCC2Q92887 1545 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 CEP57L1Q8IYX8 460 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
COLCA1-203ENST00000532918 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
COLCA1-203ENST00000532918 HSP90B2PQ58FF3 399 aa12.55□□□□□ -0.4
COLCA1-203ENST00000532918 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
COLCA1-203ENST00000532918 ZNF213O14771 459 aa12.55□□□□□ -0.4
COLCA1-203ENST00000532918 CAGE1Q8TC20 777 aa12.55□□□□□ -0.4
COLCA1-203ENST00000532918 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
COLCA1-203ENST00000532918 LMOD1P29536 600 aaPredicted RBP12.55□□□□□ -0.4
COLCA1-203ENST00000532918 TMEM266Q2M3C6 531 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 MNS1Q8NEH6 495 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
COLCA1-203ENST00000532918 EIF4G3O43432 1585 aaKnown RBP12.54□□□□□ -0.4
COLCA1-203ENST00000532918 KIF5BP33176 963 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 ZNF804AQ7Z570 1209 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
COLCA1-203ENST00000532918 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
COLCA1-203ENST00000532918 BOLA2Q9H3K6 86 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
COLCA1-203ENST00000532918 CEBPZQ03701 1054 aaKnown RBP12.54□□□□□ -0.4
COLCA1-203ENST00000532918 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
COLCA1-203ENST00000532918 PCDH11XQ9BZA7 1347 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 PCDH11YQ9BZA8 1340 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 NEBLO76041 1014 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 KCNA6P17658 529 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 IL16Q14005 1332 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 ATP10AO60312 1499 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 B4DLN1 442 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
COLCA1-203ENST00000532918 MRPL12P52815 198 aaKnown RBP12.53□□□□□ -0.4
COLCA1-203ENST00000532918 CHMP4BP1P59074 171 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 SLC12A7Q9Y666 1083 aa12.53□□□□□ -0.4
COLCA1-203ENST00000532918 FIBPO43427 364 aa12.52□□□□□ -0.4
COLCA1-203ENST00000532918 KIF20AO95235 890 aa12.52□□□□□ -0.4
COLCA1-203ENST00000532918 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.4
COLCA1-203ENST00000532918 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.4
COLCA1-203ENST00000532918 NUP160Q12769 1436 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms