RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CCDC8Q9H0W5 538 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-232ENST00000532649 CWC25Q9NXE8 425 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-232ENST00000532649 LMTK3Q96Q04 1460 aa10.27□□□□□ -0.76
CTNND1-232ENST00000532649 ANXA1P04083 346 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
CTNND1-232ENST00000532649 FILIP1LQ4L180 1135 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 PIK3R4Q99570 1358 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 TRIM27P14373 513 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 USP5P45974 858 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 PI4KAP2A4QPH2 592 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 EIF4A2Q14240 407 aaKnown RBP10.27□□□□□ -0.77
CTNND1-232ENST00000532649 DDB1Q16531 1140 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 DZIP1Q86YF9 867 aaKnown RBP10.27□□□□□ -0.77
CTNND1-232ENST00000532649 PI4KAP1Q8N8J0 262 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 FIBPO43427 364 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-232ENST00000532649 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
CTNND1-232ENST00000532649 TBX22Q9Y458 520 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 NPATQ14207 1427 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 YTHDC2Q9H6S0 1430 aaKnown RBP10.26□□□□□ -0.77
CTNND1-232ENST00000532649 KINO60870 393 aaKnown RBP10.26□□□□□ -0.77
CTNND1-232ENST00000532649 KRT32Q14532 448 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 PIP4K2AP48426 406 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-232ENST00000532649 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 UBE3BQ7Z3V4 1068 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 PPP1R42Q7Z4L9 355 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 TRPM2O94759 1503 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
CTNND1-232ENST00000532649 CWC15Q9P013 229 aaKnown RBP10.26□□□□□ -0.77
CTNND1-232ENST00000532649 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-232ENST00000532649 FLT4P35916 1363 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 C6orf229H3BNL8 230 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 IL2RBP14784 551 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 AKAP4Q5JQC9 854 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 IL16Q14005 1332 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 MINDY4BA8MYZ0 360 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 K7ELQ4 463 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-232ENST00000532649 MAP3K12Q12852 859 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 POLKQ9UBT6 870 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 CDKL5O76039 1030 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 PIBF1Q8WXW3 757 aa10.25□□□□□ -0.77
CTNND1-232ENST00000532649 CDC5LQ99459 802 aaKnown RBP10.25□□□□□ -0.77
CTNND1-232ENST00000532649 GOLGA6L10A6NI86 522 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 GCP02774 474 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 DDX46Q7L014 1031 aaKnown RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 TXLNBQ8N3L3 684 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 CRACR2BQ8N4Y2 399 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 JARID2Q92833 1246 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 LDHAL6AQ6ZMR3 332 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 PRPF40AO75400 957 aaKnown RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 BACH2Q9BYV9 841 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 LARP1BQ659C4 914 aaKnown RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 NFKBIBQ15653 356 aa10.24□□□□□ -0.77
CTNND1-232ENST00000532649 LUC7LQ9NQ29 371 aaKnown RBP10.24□□□□□ -0.77
CTNND1-232ENST00000532649 CCP110O43303 1012 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 HMGN5P82970 282 aaKnown RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 NBPF6Q5VWK0 638 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 NBPF5PQ86XG9 351 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 NBPF4Q96M43 638 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 NAPBQ9H115 298 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 ZNF287Q9HBT7 754 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 PAXIP1Q6ZW49 1069 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.773e-7■□□□□ 10.1
CTNND1-232ENST00000532649 SEPT11Q9NVA2 429 aaKnown RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 A0A1W2PP64 1363 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 CAVIN1Q6NZI2 390 aaKnown RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 ZHX3Q9H4I2 956 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 MKNK2Q9HBH9 465 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 ZNHIT6Q9NWK9 470 aaKnown RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 GOLGA6L7A0A1B0GV03 622 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 ST5P78524 1137 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-232ENST00000532649 TSPYL1Q9H0U9 437 aa10.23□□□□□ -0.77
CTNND1-232ENST00000532649 MBD3O95983 291 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 PRPF40BQ6NWY9 871 aaKnown RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 NOL7Q9UMY1 257 aaKnown RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 WDR33Q9C0J8 1336 aaKnown RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
CTNND1-232ENST00000532649 ZFYVE16Q7Z3T8 1539 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 ME1P48163 572 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 TANGO6Q9C0B7 1094 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 TESK2Q96S53 571 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 PZPP20742 1482 aa10.22□□□□□ -0.77
CTNND1-232ENST00000532649 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms