RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZBTB9Q96C00 473 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 CHMP4CQ96CF2 233 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 DONSONQ9NYP3 566 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 L2HGDHQ9H9P8 463 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 ASXL2Q76L83 1435 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 PNMA6AP0CW24 399 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-214ENST00000530886 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 GPS2Q13227 327 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 CT47A1Q5JQC4 288 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-214ENST00000530886 JRKLQ9Y4A0 524 aa9.68□□□□□ -0.86
CSDE1-214ENST00000530886 KRBA2Q6ZNG9 492 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 HECW2Q9P2P5 1572 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 ELF2Q15723 593 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 NOM1Q5C9Z4 860 aaKnown RBP9.67□□□□□ -0.86
CSDE1-214ENST00000530886 CASC1Q6TDU7 716 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 RPAINQ86UA6 219 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
CSDE1-214ENST00000530886 CDK12Q9NYV4 1490 aaPredicted RBP9.67□□□□□ -0.86
CSDE1-214ENST00000530886 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 MRPL50Q8N5N7 158 aaKnown RBP9.66□□□□□ -0.86
CSDE1-214ENST00000530886 TRERF1Q96PN7 1200 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 RPS6KA5O75582 802 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 TUBB4AP04350 444 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 MAGEA9P43362 315 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 ANAPC15P60006 121 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 MNS1Q8NEH6 495 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 ITSN1Q15811 1721 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 XRN1Q8IZH2 1706 aaKnown RBP9.66□□□□□ -0.86
CSDE1-214ENST00000530886 SMARCA5O60264 1052 aaPredicted RBP9.66□□□□□ -0.86
CSDE1-214ENST00000530886 CPP00450 1065 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 TPD52L1Q16890 204 aaPredicted RBP9.66□□□□□ -0.86
CSDE1-214ENST00000530886 PUS7Q96PZ0 661 aaKnown RBP9.66□□□□□ -0.86
CSDE1-214ENST00000530886 DCTPP1Q9H773 170 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 MED4Q9NPJ6 270 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 SALL3Q9BXA9 1300 aa9.66□□□□□ -0.86
CSDE1-214ENST00000530886 CCDC192P0DO97 292 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 SATB1Q01826 763 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 CCDC186Q7Z3E2 898 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 RRP15Q9Y3B9 282 aaKnown RBP9.65□□□□□ -0.86
CSDE1-214ENST00000530886 LRRFIP2Q9Y608 721 aaKnown RBP9.65□□□□□ -0.86
CSDE1-214ENST00000530886 TRIM66O15016 1216 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 MLECQ14165 292 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 CCDC93Q567U6 631 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 CNPY4Q8N129 248 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 SPC24Q8NBT2 197 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 EXOC4Q96A65 974 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 LCMT1Q9UIC8 334 aa9.65□□□□□ -0.86
CSDE1-214ENST00000530886 CLCN6P51797 869 aa9.65□□□□□ -0.87
CSDE1-214ENST00000530886 CCDC91Q7Z6B0 441 aa9.65□□□□□ -0.87
CSDE1-214ENST00000530886 C10orf67Q8IYJ2 551 aa9.65□□□□□ -0.87
CSDE1-214ENST00000530886 CCDC191Q8NCU4 936 aa9.65□□□□□ -0.87
CSDE1-214ENST00000530886 SPAG9O60271 1321 aaKnown RBP9.65□□□□□ -0.87
CSDE1-214ENST00000530886 SSH2Q76I76 1423 aa9.65□□□□□ -0.87
CSDE1-214ENST00000530886 ZNF75DP51815 510 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 NEK11Q8NG66 645 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 SLC12A5Q9H2X9 1139 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 NEXMIFQ5QGS0 1516 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 EPB41L2O43491 1005 aaKnown RBP9.64□□□□□ -0.87
CSDE1-214ENST00000530886 VAMP4O75379 141 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 PRR29P0C7W0 189 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 ZNF853P0CG23 659 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 TTC31Q49AM3 519 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-214ENST00000530886 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 KIDINS220Q9ULH0 1771 aa9.64□□□□□ -0.87
CSDE1-214ENST00000530886 ERC2O15083 957 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 IVLP07476 585 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 HSP90B1P14625 803 aaKnown RBP9.63□□□□□ -0.87
CSDE1-214ENST00000530886 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 TDRD7Q8NHU6 1098 aaKnown RBP9.63□□□□□ -0.87
CSDE1-214ENST00000530886 SMARCE1Q969G3 411 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 GYS2P54840 703 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 LRMPQ12912 555 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 SRCIN1Q9C0H9 1055 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
CSDE1-214ENST00000530886 GTF3C6Q969F1 213 aa9.63□□□□□ -0.87
CSDE1-214ENST00000530886 SDSP20132 328 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 NBPF20Q3BBV1 942 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 FILIP1Q7Z7B0 1213 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-214ENST00000530886 OTUD7AQ8TE49 926 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-214ENST00000530886 CACTINQ8WUQ7 758 aaKnown RBP9.62□□□□□ -0.87
CSDE1-214ENST00000530886 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 AK7Q96M32 723 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 OSBPL3Q9H4L5 887 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 ARGLU1Q9NWB6 273 aaPredicted RBP9.62□□□□□ -0.87
CSDE1-214ENST00000530886 ATP7AQ04656 1500 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 SARM1Q6SZW1 724 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 RBM43Q6ZSC3 357 aaKnown RBP9.62□□□□□ -0.87
CSDE1-214ENST00000530886 PACS2Q86VP3 889 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 REXO1L1PQ8IX06 675 aa9.62□□□□□ -0.87
CSDE1-214ENST00000530886 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms