RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	HSPA4	P34932	840 aa		28.42	■■■□□ 2.14
GSDMD-208	ENST00000528475	RHPN1	Q8TCX5	695 aa		28.41	■■■□□ 2.14
GSDMD-208	ENST00000528475	KIF1BP	Q96EK5	621 aa		28.41	■■■□□ 2.14
GSDMD-208	ENST00000528475	PHF8	Q9UPP1	1060 aa		28.41	■■■□□ 2.14
GSDMD-208	ENST00000528475	LMO7	Q8WWI1	1683 aa		28.41	■■■□□ 2.14
GSDMD-208	ENST00000528475	PI4K2B	Q8TCG2	481 aa		28.41	■■■□□ 2.14
GSDMD-208	ENST00000528475	IL1RAPL2	Q9NP60	686 aa		28.41	■■■□□ 2.14
GSDMD-208	ENST00000528475	ADGRL3	Q9HAR2	1447 aa		28.4	■■■□□ 2.14
GSDMD-208	ENST00000528475	SURF6	O75683	361 aa	Known RBP	28.4	■■■□□ 2.14
GSDMD-208	ENST00000528475	USHBP1	Q8N6Y0	703 aa		28.4	■■■□□ 2.14
GSDMD-208	ENST00000528475	BEND3	Q5T5X7	828 aa		28.39	■■■□□ 2.14
GSDMD-208	ENST00000528475	CRYBG1	Q9Y4K1	1723 aa		28.39	■■■□□ 2.14
GSDMD-208	ENST00000528475	NAP1L5	Q96NT1	182 aa	Predicted RBP	28.39	■■■□□ 2.13
GSDMD-208	ENST00000528475	HS1BP3	Q53T59	392 aa		28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	NUTM1	Q86Y26	1132 aa		28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	DNAAF4	Q8WXU2	420 aa		28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	RBSN	Q9H1K0	784 aa		28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	PLEKHG5	O94827	1062 aa		28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	HSP90AB4P	Q58FF6	505 aa		28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	USP42	Q9H9J4	1324 aa	Known RBP	28.38	■■■□□ 2.13
GSDMD-208	ENST00000528475	NBPF6	Q5VWK0	638 aa		28.37	■■■□□ 2.13
GSDMD-208	ENST00000528475	LRSAM1	Q6UWE0	723 aa		28.37	■■■□□ 2.13
GSDMD-208	ENST00000528475	ZSCAN30	Q86W11	494 aa		28.37	■■■□□ 2.13
GSDMD-208	ENST00000528475	NBPF4	Q96M43	638 aa		28.37	■■■□□ 2.13
GSDMD-208	ENST00000528475	PRIM1	P49642	420 aa	Known RBP	28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	TMEM63C	Q9P1W3	806 aa		28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	CHD2	O14647	1828 aa	Known RBP	28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	RAD50	Q92878	1312 aa		28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	SGSM2	O43147	1006 aa		28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	SRGAP3	O43295	1099 aa		28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	PDLIM2	Q96JY6	352 aa		28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	IL25	Q9H293	177 aa		28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	RBM27	Q9P2N5	1060 aa	Known RBP	28.36	■■■□□ 2.13
GSDMD-208	ENST00000528475	CHPF2	Q9P2E5	772 aa		28.35	■■■□□ 2.13
GSDMD-208	ENST00000528475	SETD1B	Q9UPS6	1966 aa	Known RBP	28.35	■■■□□ 2.13
GSDMD-208	ENST00000528475	EIF2S2	P20042	333 aa	Known RBP	28.34	■■■□□ 2.13
GSDMD-208	ENST00000528475	LGR6	Q9HBX8	967 aa		28.34	■■■□□ 2.13
GSDMD-208	ENST00000528475	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.34	■■■□□ 2.13
GSDMD-208	ENST00000528475	AKAP4	Q5JQC9	854 aa		28.34	■■■□□ 2.13
GSDMD-208	ENST00000528475	CNTROB	Q8N137	903 aa		28.34	■■■□□ 2.13
GSDMD-208	ENST00000528475	KCNH5	Q8NCM2	988 aa		28.34	■■■□□ 2.13
GSDMD-208	ENST00000528475	MTX1	Q13505	466 aa		28.33	■■■□□ 2.13
GSDMD-208	ENST00000528475	C14orf37	Q86TY3	774 aa		28.33	■■■□□ 2.13
GSDMD-208	ENST00000528475	OVOS2	A0A0G2JMS6	1433 aa		28.33	■■■□□ 2.13
GSDMD-208	ENST00000528475	UPF3B	Q9BZI7	483 aa	Known RBP	28.33	■■■□□ 2.13
GSDMD-208	ENST00000528475	NCAPD2	Q15021	1401 aa		28.32	■■■□□ 2.12
GSDMD-208	ENST00000528475	TTC41P	Q6P2S7	1318 aa		28.32	■■■□□ 2.12
GSDMD-208	ENST00000528475	PI4KAP2	A4QPH2	592 aa		28.32	■■■□□ 2.12
GSDMD-208	ENST00000528475	PI4KAP1	Q8N8J0	262 aa		28.32	■■■□□ 2.12
GSDMD-208	ENST00000528475	ADCY9	O60503	1353 aa		28.32	■■■□□ 2.12
GSDMD-208	ENST00000528475	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.31	■■■□□ 2.12
GSDMD-208	ENST00000528475	PRKCSH	P14314	528 aa	Predicted RBP	28.31	■■■□□ 2.12
GSDMD-208	ENST00000528475	CHAMP1	Q96JM3	812 aa		28.31	■■■□□ 2.12
GSDMD-208	ENST00000528475	LSG1	Q9H089	658 aa	Known RBP	28.31	■■■□□ 2.12
GSDMD-208	ENST00000528475	WDR33	Q9C0J8	1336 aa	Known RBP	28.3	■■■□□ 2.12
GSDMD-208	ENST00000528475	TEF	Q10587	303 aa		28.3	■■■□□ 2.12
GSDMD-208	ENST00000528475	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.3	■■■□□ 2.12
GSDMD-208	ENST00000528475	FOXD4L5	Q5VV16	416 aa	Predicted RBP	28.3	■■■□□ 2.12
GSDMD-208	ENST00000528475	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	28.3	■■■□□ 2.12
GSDMD-208	ENST00000528475	BTBD11	A6QL63	1104 aa		28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	AMOT	Q4VCS5	1084 aa		28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	TTC14	Q96N46	770 aa		28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	SNX14	Q9Y5W7	946 aa		28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	RGPD2	P0DJD1	1756 aa		28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	KCNQ3	O43525	872 aa		28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	NOL8	Q76FK4	1167 aa	Known RBP	28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	DBF4	Q9UBU7	674 aa	Predicted RBP	28.28	■■■□□ 2.12
GSDMD-208	ENST00000528475	SYCE3	A1L190	88 aa		28.27	■■■□□ 2.12
GSDMD-208	ENST00000528475	ALDH1L1	O75891	902 aa		28.27	■■■□□ 2.12
GSDMD-208	ENST00000528475	GLRX3	O76003	335 aa	Known RBP	28.27	■■■□□ 2.12
GSDMD-208	ENST00000528475	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.27	■■■□□ 2.12
GSDMD-208	ENST00000528475	SYAP1	Q96A49	352 aa	Predicted RBP	28.27	■■■□□ 2.12
GSDMD-208	ENST00000528475	MAP4K4	O95819	1239 aa	Predicted RBP	28.26	■■■□□ 2.11
GSDMD-208	ENST00000528475	HDAC5	Q9UQL6	1122 aa		28.26	■■■□□ 2.11
GSDMD-208	ENST00000528475	HEG1	Q9ULI3	1381 aa		28.25	■■■□□ 2.11
GSDMD-208	ENST00000528475	LMTK3	Q96Q04	1460 aa		28.24	■■■□□ 2.11
GSDMD-208	ENST00000528475	RNMT	O43148	476 aa	Known RBP	28.24	■■■□□ 2.11
GSDMD-208	ENST00000528475	MSN	P26038	577 aa	Known RBP	28.24	■■■□□ 2.11
GSDMD-208	ENST00000528475	KIAA1211	Q6ZU35	1233 aa		28.24	■■■□□ 2.11
GSDMD-208	ENST00000528475	TMEM87A	Q8NBN3	555 aa		28.24	■■■□□ 2.11
GSDMD-208	ENST00000528475	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.23	■■■□□ 2.11
GSDMD-208	ENST00000528475	SLIT3	O75094	1523 aa		28.23	■■■□□ 2.11
GSDMD-208	ENST00000528475	PSME1	Q06323	249 aa		28.23	■■■□□ 2.11
GSDMD-208	ENST00000528475	NOL7	Q9UMY1	257 aa	Known RBP	28.23	■■■□□ 2.11
GSDMD-208	ENST00000528475	CAMTA1	Q9Y6Y1	1673 aa		28.22	■■■□□ 2.11
GSDMD-208	ENST00000528475	RUFY2	Q8WXA3	655 aa		28.22	■■■□□ 2.11
GSDMD-208	ENST00000528475	ERC1	Q8IUD2	1116 aa		28.22	■■■□□ 2.11
GSDMD-208	ENST00000528475	CLASRP	Q8N2M8	674 aa	Known RBP	28.22	■■■□□ 2.11
GSDMD-208	ENST00000528475	LIMCH1	Q9UPQ0	1083 aa		28.21	■■■□□ 2.11
GSDMD-208	ENST00000528475	NPHP4	O75161	1426 aa	Predicted RBP	28.21	■■■□□ 2.11
GSDMD-208	ENST00000528475	KSR2	Q6VAB6	950 aa		28.2	■■■□□ 2.11
GSDMD-208	ENST00000528475	MPRIP	Q6WCQ1	1025 aa		28.2	■■■□□ 2.11
GSDMD-208	ENST00000528475	RASEF	Q8IZ41	740 aa		28.2	■■■□□ 2.11
GSDMD-208	ENST00000528475	LRRC59	Q96AG4	307 aa	Known RBP	28.2	■■■□□ 2.11
GSDMD-208	ENST00000528475	PXDN	Q92626	1479 aa		28.2	■■■□□ 2.1
GSDMD-208	ENST00000528475	AK2	P54819	239 aa		28.2	■■■□□ 2.1
GSDMD-208	ENST00000528475	GIGYF1	O75420	1035 aa	Predicted RBP	28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	PHF14	O94880	888 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	ANXA1	P04083	346 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	OS9	Q13438	667 aa	Predicted RBP	28.19	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms