RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	CLUAP1	Q96AJ1	413 aa		7.93	□□□□□ -1.14
PABPC4-222	ENST00000527718	TSPYL4	Q9UJ04	414 aa		7.93	□□□□□ -1.14
PABPC4-222	ENST00000527718	OVOS2	A0A0G2JMS6	1433 aa		7.93	□□□□□ -1.14
PABPC4-222	ENST00000527718	ZNF853	P0CG23	659 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	TAF7	Q15545	349 aa	Predicted RBP	7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	CCDC30	Q5VVM6	783 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	BRINP3	Q76B58	766 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	EXOC6	Q8TAG9	804 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	ANKRD24	Q8TF21	1146 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	PHACTR3	Q96KR7	559 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	CRBN	Q96SW2	442 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	SPATA31A3	Q5VYP0	1347 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	CPD	O75976	1380 aa		7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	PHRF1	Q9P1Y6	1649 aa	Known RBP	7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	RGPD8	O14715	1765 aa	Predicted RBP	7.92	□□□□□ -1.14
PABPC4-222	ENST00000527718	SENP3-EIF4A1	A0A087X0R7	540 aa		7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	CHL1	O00533	1208 aa		7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	MVP	Q14764	893 aa	Known RBP	7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	NPM2	Q86SE8	214 aa	Known RBP	7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	PTCD2	Q8WV60	388 aa	Known RBP	7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	LRRC59	Q96AG4	307 aa	Known RBP	7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	LTV1	Q96GA3	475 aa	Predicted RBP	7.91	□□□□□ -1.14
PABPC4-222	ENST00000527718	PHLPP1	O60346	1717 aa		7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	NFAT5	O94916	1531 aa		7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	PLIN1	O60240	522 aa		7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	BCAR3	O75815	825 aa		7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	ITPRIP	Q8IWB1	547 aa		7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	TSR2	Q969E8	191 aa	Known RBP	7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	MBIP	Q9NS73	344 aa		7.9	□□□□□ -1.14
PABPC4-222	ENST00000527718	NHSL1	Q5SYE7	1610 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	SOS2	Q07890	1332 aa	Predicted RBP	7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	STK25	O00506	426 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	HMMR	O75330	724 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	VAMP4	O75379	141 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	FBLN1	P23142	703 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	MTHFSD	Q2M296	383 aa	Known RBP	7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	TMC2	Q8TDI7	906 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	SSH1	Q8WYL5	1049 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	PRDM11	Q9NQV5	511 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	NLRP2	Q9NX02	1062 aa		7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	COL16A1	Q07092	1604 aa	Predicted RBP	7.89	□□□□□ -1.15
PABPC4-222	ENST00000527718	MED1	Q15648	1581 aa	Predicted RBP	7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	ANP32A	P39687	249 aa	Known RBP	7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	CCT4	P50991	539 aa	Known RBP	7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	EVA1C	P58658	441 aa		7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	PLCB2	Q00722	1185 aa		7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	AEBP1	Q8IUX7	1158 aa		7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	IFNL2	Q8IZJ0	200 aa		7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	DDX17	Q92841	729 aa	Known RBP	7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	UPF2	Q9HAU5	1272 aa	Known RBP	7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	NOB1	Q9ULX3	412 aa	Known RBP	7.88	□□□□□ -1.15
PABPC4-222	ENST00000527718	RGPD1	P0DJD0	1748 aa		7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	DDX58	O95786	925 aa	Known RBP	7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	ZC3H6	P61129	1189 aa	Known RBP	7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	XPC	Q01831	940 aa	Predicted RBP	7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	GCC1	Q96CN9	775 aa		7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	COG6	Q9Y2V7	657 aa		7.87	□□□□□ -1.15
PABPC4-222	ENST00000527718	FAM208A	Q9UK61	1670 aa	Known RBP	7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	GNAI3	P08754	354 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	TRIM27	P14373	513 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	HDAC1	Q13547	482 aa	Predicted RBP	7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	NBPF6	Q5VWK0	638 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	MCM10	Q7L590	875 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	TTC5	Q8N0Z6	440 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	MRPL50	Q8N5N7	158 aa	Known RBP	7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	DCAF5	Q96JK2	942 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	NBPF4	Q96M43	638 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	PXDN	Q92626	1479 aa		7.86	□□□□□ -1.15
PABPC4-222	ENST00000527718	JCAD	Q9P266	1359 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	WDR17	Q8IZU2	1322 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	PCDH11X	Q9BZA7	1347 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	PCDH11Y	Q9BZA8	1340 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	BTBD11	A6QL63	1104 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	HMGB2	P26583	209 aa	Known RBP	7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	DMRTA1	Q5VZB9	504 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	TOM1L2	Q6ZVM7	507 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	PANK1	Q8TE04	598 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	BCL2L13	Q9BXK5	485 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	PEAK1	Q9H792	1746 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	TRPM3	Q9HCF6	1732 aa	Predicted RBP	7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	CRB1	P82279	1406 aa		7.85	□□□□□ -1.15
PABPC4-222	ENST00000527718	CEMIP	Q8WUJ3	1361 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	ALS2	Q96Q42	1657 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	PPP1R37	O75864	691 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	FOXK1	P85037	733 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	IFFO2	Q5TF58	517 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	HDGFL1	Q5TGJ6	251 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	DDRGK1	Q96HY6	314 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	CARD10	Q9BWT7	1032 aa		7.84	□□□□□ -1.15
PABPC4-222	ENST00000527718	ABCC4	O15439	1325 aa		7.83	□□□□□ -1.16
PABPC4-222	ENST00000527718	FAM83G	A6ND36	823 aa		7.83	□□□□□ -1.16
PABPC4-222	ENST00000527718	RNMT	O43148	476 aa	Known RBP	7.83	□□□□□ -1.16
PABPC4-222	ENST00000527718	DCTN1	Q14203	1278 aa		7.83	□□□□□ -1.16
PABPC4-222	ENST00000527718	C20orf194	Q5TEA3	1177 aa		7.83	□□□□□ -1.16
PABPC4-222	ENST00000527718	INTS3	Q68E01	1043 aa	Known RBP	7.83	□□□□□ -1.16
PABPC4-222	ENST00000527718	THUMPD2	Q9BTF0	503 aa	Known RBP	7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms