RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
SCN3B-203ENST00000527125 LAMA4Q16363 1823 aa11.24□□□□□ -0.61
SCN3B-203ENST00000527125 MRC1P22897 1456 aa11.24□□□□□ -0.61
SCN3B-203ENST00000527125 LETM1O95202 739 aaPredicted RBP11.24□□□□□ -0.61
SCN3B-203ENST00000527125 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
SCN3B-203ENST00000527125 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
SCN3B-203ENST00000527125 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
SCN3B-203ENST00000527125 SYAP1Q96A49 352 aaPredicted RBP11.24□□□□□ -0.61
SCN3B-203ENST00000527125 JCADQ9P266 1359 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 DIP2BQ9P265 1576 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 HMMRO75330 724 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 PHF14O94880 888 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 ATP2B3Q16720 1220 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 RBM43Q6ZSC3 357 aaKnown RBP11.23□□□□□ -0.61
SCN3B-203ENST00000527125 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 RNF214Q8ND24 703 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
SCN3B-203ENST00000527125 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
SCN3B-203ENST00000527125 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
SCN3B-203ENST00000527125 ADCY5O95622 1261 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
SCN3B-203ENST00000527125 UBE2HP62256 183 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 SYCP1Q15431 976 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 RUFY3Q7L099 469 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 SNX14Q9Y5W7 946 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 CAMTA1Q9Y6Y1 1673 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 SGSM2O43147 1006 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 MCM10Q7L590 875 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 GNAI2P04899 355 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 COG3Q96JB2 828 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 FAM53CQ9NYF3 392 aa11.22□□□□□ -0.61
SCN3B-203ENST00000527125 LTN1O94822 1766 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 CCDC171Q6TFL3 1326 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 NCKAP5LQ9HCH0 1330 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.61
SCN3B-203ENST00000527125 MAP3K19Q56UN5 1328 aa11.21□□□□□ -0.62
SCN3B-203ENST00000527125 CNPY2Q9Y2B0 182 aa11.21□□□□□ -0.62
SCN3B-203ENST00000527125 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 GTPBP4Q9BZE4 634 aaKnown RBP11.2□□□□□ -0.62
SCN3B-203ENST00000527125 TTC21AQ8NDW8 1320 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 HTATSF1O43719 755 aaKnown RBP11.2□□□□□ -0.62
SCN3B-203ENST00000527125 F13A1P00488 732 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCN3B-203ENST00000527125 TTC12Q9H892 705 aaPredicted RBP11.2□□□□□ -0.62
SCN3B-203ENST00000527125 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 SYT1P21579 422 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 ZNF830Q96NB3 372 aaPredicted RBP11.2□□□□□ -0.62
SCN3B-203ENST00000527125 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 HYPKQ9NX55 129 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 EXOC6BQ9Y2D4 811 aa11.2□□□□□ -0.62
SCN3B-203ENST00000527125 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 F6X3S4 739 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 TSC1Q92574 1164 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 ELP1O95163 1332 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 LARGE1O95461 756 aa11.19□□□□□ -0.62
SCN3B-203ENST00000527125 MTHFSDQ2M296 383 aaKnown RBP11.19□□□□□ -0.62
SCN3B-203ENST00000527125 C17orf53Q8N3J3 647 aaPredicted RBP11.19□□□□□ -0.62
SCN3B-203ENST00000527125 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
SCN3B-203ENST00000527125 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
SCN3B-203ENST00000527125 HCLS1P14317 486 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-203ENST00000527125 MCCP23508 829 aa11.18□□□□□ -0.62
SCN3B-203ENST00000527125 AK2P54819 239 aa11.18□□□□□ -0.62
SCN3B-203ENST00000527125 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
SCN3B-203ENST00000527125 ALDH8A1Q9H2A2 487 aaPredicted RBP11.18□□□□□ -0.62
SCN3B-203ENST00000527125 STX6O43752 255 aa11.18□□□□□ -0.62
SCN3B-203ENST00000527125 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-203ENST00000527125 GNAI3P08754 354 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 PLA2G4DQ86XP0 818 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 UPF3BQ9BZI7 483 aaKnown RBP11.17□□□□□ -0.62
SCN3B-203ENST00000527125 ADCY9O60503 1353 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 CEMIPQ8WUJ3 1361 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 TPM3P06753 285 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 FOXD4L5Q5VV16 416 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-203ENST00000527125 FOXD4L4Q8WXT5 416 aaPredicted RBP11.17□□□□□ -0.62
SCN3B-203ENST00000527125 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 KIF3AQ9Y496 699 aa11.17□□□□□ -0.62
SCN3B-203ENST00000527125 FOXO3O43524 673 aa11.16□□□□□ -0.62
SCN3B-203ENST00000527125 KIF20AO95235 890 aa11.16□□□□□ -0.62
SCN3B-203ENST00000527125 FLIIQ13045 1269 aa11.16□□□□□ -0.62
SCN3B-203ENST00000527125 HSP90AB2PQ58FF8 381 aa11.16□□□□□ -0.62
SCN3B-203ENST00000527125 LIMCH1Q9UPQ0 1083 aa11.16□□□□□ -0.62
SCN3B-203ENST00000527125 ABCC6O95255 1503 aa11.16□□□□□ -0.62
SCN3B-203ENST00000527125 SLIT1O75093 1534 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms