RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
PVT1-207ENST00000518528 NFKBIEO00221 500 aa12.24□□□□□ -0.45
PVT1-207ENST00000518528 FOXN1O15353 648 aa12.24□□□□□ -0.45
PVT1-207ENST00000518528 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
PVT1-207ENST00000518528 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
PVT1-207ENST00000518528 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
PVT1-207ENST00000518528 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
PVT1-207ENST00000518528 ZNF622Q969S3 477 aaKnown RBP eCLIP12.23□□□□□ -0.45
PVT1-207ENST00000518528 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
PVT1-207ENST00000518528 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
PVT1-207ENST00000518528 POTECB2RU33 542 aa12.22□□□□□ -0.45
PVT1-207ENST00000518528 PDE6BP35913 854 aa12.22□□□□□ -0.45
PVT1-207ENST00000518528 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
PVT1-207ENST00000518528 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.45
PVT1-207ENST00000518528 A0A087WZG4 1122 aa12.21□□□□□ -0.45
PVT1-207ENST00000518528 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
PVT1-207ENST00000518528 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
PVT1-207ENST00000518528 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.45
PVT1-207ENST00000518528 PCNTO95613 3336 aa12.2□□□□□ -0.46
PVT1-207ENST00000518528 TMEM88BA6NKF7 163 aa12.2□□□□□ -0.46
PVT1-207ENST00000518528 NPHP1O15259 732 aa12.2□□□□□ -0.46
PVT1-207ENST00000518528 C21orf2O43822 256 aa12.2□□□□□ -0.46
PVT1-207ENST00000518528 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
PVT1-207ENST00000518528 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
PVT1-207ENST00000518528 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
PVT1-207ENST00000518528 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
PVT1-207ENST00000518528 COL15A1P39059 1388 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 STARD3NLO95772 234 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 VEGFBP49765 207 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
PVT1-207ENST00000518528 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
PVT1-207ENST00000518528 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
PVT1-207ENST00000518528 LBX1P52954 281 aa12.18□□□□□ -0.46
PVT1-207ENST00000518528 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
PVT1-207ENST00000518528 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
PVT1-207ENST00000518528 SULT6B1Q6IMI4 303 aa12.18□□□□□ -0.46
PVT1-207ENST00000518528 VSIG10Q8N0Z9 540 aa12.18□□□□□ -0.46
PVT1-207ENST00000518528 ABHD8Q96I13 439 aa12.18□□□□□ -0.46
PVT1-207ENST00000518528 WBP1LQ9NX94 342 aa12.18□□□□□ -0.46
PVT1-207ENST00000518528 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
PVT1-207ENST00000518528 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
PVT1-207ENST00000518528 POLR3GLQ9BT43 218 aa12.17□□□□□ -0.46
PVT1-207ENST00000518528 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
PVT1-207ENST00000518528 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
PVT1-207ENST00000518528 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
PVT1-207ENST00000518528 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
PVT1-207ENST00000518528 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
PVT1-207ENST00000518528 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
PVT1-207ENST00000518528 CANXP27824 592 aaKnown RBP12.16□□□□□ -0.46
PVT1-207ENST00000518528 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
PVT1-207ENST00000518528 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
PVT1-207ENST00000518528 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
PVT1-207ENST00000518528 TAF1DQ9H5J8 278 aaPredicted RBP12.16□□□□□ -0.46
PVT1-207ENST00000518528 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
PVT1-207ENST00000518528 ST5P78524 1137 aa12.15□□□□□ -0.46
PVT1-207ENST00000518528 MLLT1Q03111 559 aaPredicted RBP12.15□□□□□ -0.46
PVT1-207ENST00000518528 SLC39A6Q13433 755 aa12.15□□□□□ -0.46
PVT1-207ENST00000518528 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
PVT1-207ENST00000518528 STYK1Q6J9G0 422 aa12.15□□□□□ -0.46
PVT1-207ENST00000518528 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
PVT1-207ENST00000518528 MYH14Q7Z406 1995 aaKnown RBP12.15□□□□□ -0.46
PVT1-207ENST00000518528 SBF1O95248 1867 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 PNMA8AQ86V59 439 aaPredicted RBP12.14□□□□□ -0.47
PVT1-207ENST00000518528 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 SETDB2Q96T68 719 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
PVT1-207ENST00000518528 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 CARMIL3Q8ND23 1372 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
PVT1-207ENST00000518528 RASSF10A6NK89 507 aa12.13□□□□□ -0.47
PVT1-207ENST00000518528 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
PVT1-207ENST00000518528 RNMTO43148 476 aaKnown RBP12.13□□□□□ -0.47
PVT1-207ENST00000518528 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
PVT1-207ENST00000518528 HSPA8P11142 646 aaKnown RBP12.13□□□□□ -0.47
PVT1-207ENST00000518528 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
PVT1-207ENST00000518528 PRR5LQ6MZQ0 368 aa12.13□□□□□ -0.47
PVT1-207ENST00000518528 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
PVT1-207ENST00000518528 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
PVT1-207ENST00000518528 ABT1Q9ULW3 272 aaKnown RBP12.13□□□□□ -0.47
PVT1-207ENST00000518528 EPHX2P34913 555 aa12.12□□□□□ -0.47
PVT1-207ENST00000518528 EIF5P55010 431 aaKnown RBP12.12□□□□□ -0.47
PVT1-207ENST00000518528 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
PVT1-207ENST00000518528 LGR6Q9HBX8 967 aa12.12□□□□□ -0.47
PVT1-207ENST00000518528 ZNF330Q9Y3S2 320 aaPredicted RBP12.12□□□□□ -0.47
PVT1-207ENST00000518528 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
PVT1-207ENST00000518528 SRGNP10124 158 aa12.11□□□□□ -0.47
PVT1-207ENST00000518528 ECE1P42892 770 aa12.11□□□□□ -0.47
PVT1-207ENST00000518528 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
PVT1-207ENST00000518528 IL13P35225 146 aa12.1□□□□□ -0.47
PVT1-207ENST00000518528 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
PVT1-207ENST00000518528 CCDC24Q8N4L8 307 aa12.1□□□□□ -0.47
PVT1-207ENST00000518528 TIAM2Q8IVF5 1701 aa12.09□□□□□ -0.47
PVT1-207ENST00000518528 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
PVT1-207ENST00000518528 FKBP4Q02790 459 aaKnown RBP eCLIP12.09□□□□□ -0.47
PVT1-207ENST00000518528 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms