RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PCDH11XQ9BZA7 1347 aa32.94■■■□□ 2.86
COL13A1-210ENST00000517713 PCDH11YQ9BZA8 1340 aa32.94■■■□□ 2.86
COL13A1-210ENST00000517713 GSPT1P15170 499 aaKnown RBP32.93■■■□□ 2.86
COL13A1-210ENST00000517713 TTC22Q5TAA0 569 aa32.93■■■□□ 2.86
COL13A1-210ENST00000517713 MAP3K2Q9Y2U5 619 aa32.93■■■□□ 2.86
COL13A1-210ENST00000517713 EVA1CP58658 441 aa32.92■■■□□ 2.86
COL13A1-210ENST00000517713 OTUD7AQ8TE49 926 aaPredicted RBP32.92■■■□□ 2.86
COL13A1-210ENST00000517713 ZNF496Q96IT1 587 aaPredicted RBP32.92■■■□□ 2.86
COL13A1-210ENST00000517713 PDIA6Q15084 440 aa32.92■■■□□ 2.86
COL13A1-210ENST00000517713 STRN4Q9NRL3 753 aa32.92■■■□□ 2.86
COL13A1-210ENST00000517713 EXOC6BQ9Y2D4 811 aa32.92■■■□□ 2.86
COL13A1-210ENST00000517713 IL2RBP14784 551 aa32.9■■■□□ 2.86
COL13A1-210ENST00000517713 LARP1Q6PKG0 1096 aaKnown RBP32.9■■■□□ 2.86
COL13A1-210ENST00000517713 BECN1Q14457 450 aa32.89■■■□□ 2.86
COL13A1-210ENST00000517713 DDX58O95786 925 aaKnown RBP32.89■■■□□ 2.85
COL13A1-210ENST00000517713 NBPF7P0C2Y1 421 aaPredicted RBP32.89■■■□□ 2.85
COL13A1-210ENST00000517713 TBC1D9Q6ZT07 1266 aa32.89■■■□□ 2.85
COL13A1-210ENST00000517713 ALDH1L1O75891 902 aa32.88■■■□□ 2.85
COL13A1-210ENST00000517713 SNRPA1P09661 255 aaKnown RBP32.88■■■□□ 2.85
COL13A1-210ENST00000517713 FMNL2Q96PY5 1086 aa32.88■■■□□ 2.85
COL13A1-210ENST00000517713 CDC45O75419 566 aa32.87■■■□□ 2.85
COL13A1-210ENST00000517713 SSH3Q8TE77 659 aa32.87■■■□□ 2.85
COL13A1-210ENST00000517713 LRRCC1Q9C099 1032 aa32.87■■■□□ 2.85
COL13A1-210ENST00000517713 IBTKQ9P2D0 1353 aaPredicted RBP32.86■■■□□ 2.85
COL13A1-210ENST00000517713 AIMP1Q12904 312 aaKnown RBP32.85■■■□□ 2.85
COL13A1-210ENST00000517713 PPP1R42Q7Z4L9 355 aa32.84■■■□□ 2.85
COL13A1-210ENST00000517713 POLA2Q14181 598 aa32.84■■■□□ 2.85
COL13A1-210ENST00000517713 NKX1-1Q15270 411 aaPredicted RBP32.84■■■□□ 2.85
COL13A1-210ENST00000517713 ROBO1Q9Y6N7 1651 aa32.83■■■□□ 2.85
COL13A1-210ENST00000517713 ERVV-2B6SEH9 535 aa32.82■■■□□ 2.84
COL13A1-210ENST00000517713 OSBPL3Q9H4L5 887 aa32.82■■■□□ 2.84
COL13A1-210ENST00000517713 USP16Q9Y5T5 823 aa32.82■■■□□ 2.84
COL13A1-210ENST00000517713 MYL6BP14649 208 aa32.82■■■□□ 2.84
COL13A1-210ENST00000517713 NBR1Q14596 966 aa32.82■■■□□ 2.84
COL13A1-210ENST00000517713 RBM25P49756 843 aaKnown RBP32.81■■■□□ 2.84
COL13A1-210ENST00000517713 LINS1Q8NG48 757 aa32.81■■■□□ 2.84
COL13A1-210ENST00000517713 C9orf78Q9NZ63 289 aaPredicted RBP32.81■■■□□ 2.84
COL13A1-210ENST00000517713 SHANK3Q9BYB0 1731 aa32.8■■■□□ 2.84
COL13A1-210ENST00000517713 PDE1AP54750 535 aa32.8■■■□□ 2.84
COL13A1-210ENST00000517713 SRGAP3O43295 1099 aa32.79■■■□□ 2.84
COL13A1-210ENST00000517713 CWF19L2Q2TBE0 894 aaKnown RBP32.79■■■□□ 2.84
COL13A1-210ENST00000517713 DDX54Q8TDD1 881 aaKnown RBP32.79■■■□□ 2.84
COL13A1-210ENST00000517713 RIC3Q7Z5B4 369 aa32.78■■■□□ 2.84
COL13A1-210ENST00000517713 HDAC5Q9UQL6 1122 aa32.78■■■□□ 2.84
COL13A1-210ENST00000517713 EIF5BO60841 1220 aaKnown RBP32.78■■■□□ 2.84
COL13A1-210ENST00000517713 SDSP20132 328 aa32.78■■■□□ 2.84
COL13A1-210ENST00000517713 XAGE3Q8WTP9 111 aa32.78■■■□□ 2.84
COL13A1-210ENST00000517713 BTG4Q9NY30 223 aa32.78■■■□□ 2.84
COL13A1-210ENST00000517713 AHDC1Q5TGY3 1603 aaPredicted RBP32.78■■■□□ 2.84
COL13A1-210ENST00000517713 RAB11FIP3O75154 756 aa32.77■■■□□ 2.84
COL13A1-210ENST00000517713 SALL3Q9BXA9 1300 aa32.77■■■□□ 2.84
COL13A1-210ENST00000517713 COPS6Q7L5N1 327 aa32.77■■■□□ 2.84
COL13A1-210ENST00000517713 GLI3P10071 1580 aa32.76■■■□□ 2.83
COL13A1-210ENST00000517713 SURF6O75683 361 aaKnown RBP32.75■■■□□ 2.83
COL13A1-210ENST00000517713 LRP10Q7Z4F1 713 aa32.75■■■□□ 2.83
COL13A1-210ENST00000517713 USP35Q9P2H5 1018 aa32.75■■■□□ 2.83
COL13A1-210ENST00000517713 LAMB4A4D0S4 1761 aa32.74■■■□□ 2.83
COL13A1-210ENST00000517713 TBC1D2Q9BYX2 928 aa32.74■■■□□ 2.83
COL13A1-210ENST00000517713 COL14A1Q05707 1796 aaKnown RBP32.74■■■□□ 2.83
COL13A1-210ENST00000517713 MTX1Q13505 466 aa32.73■■■□□ 2.83
COL13A1-210ENST00000517713 UTYO14607 1347 aa32.73■■■□□ 2.83
COL13A1-210ENST00000517713 LTBP4Q8N2S1 1624 aa32.72■■■□□ 2.83
COL13A1-210ENST00000517713 COL22A1Q8NFW1 1626 aaPredicted RBP32.72■■■□□ 2.83
COL13A1-210ENST00000517713 GRM8O00222 908 aa32.72■■■□□ 2.83
COL13A1-210ENST00000517713 MX1P20591 662 aa32.72■■■□□ 2.83
COL13A1-210ENST00000517713 NEXNQ0ZGT2 675 aa32.72■■■□□ 2.83
COL13A1-210ENST00000517713 MYT1Q01538 1121 aa32.72■■■□□ 2.83
COL13A1-210ENST00000517713 IGKV5-2P06315 115 aa32.71■■■□□ 2.83
COL13A1-210ENST00000517713 ANKRD13DQ6ZTN6 518 aa32.71■■■□□ 2.83
COL13A1-210ENST00000517713 METTL22Q9BUU2 404 aaPredicted RBP32.71■■■□□ 2.83
COL13A1-210ENST00000517713 UBR2Q8IWV8 1755 aa32.71■■■□□ 2.83
COL13A1-210ENST00000517713 CASC1Q6TDU7 716 aa32.7■■■□□ 2.83
COL13A1-210ENST00000517713 PAPPAQ13219 1627 aa32.7■■■□□ 2.83
COL13A1-210ENST00000517713 PIP4K2AP48426 406 aaPredicted RBP32.7■■■□□ 2.82
COL13A1-210ENST00000517713 STAP2Q9UGK3 403 aa32.7■■■□□ 2.82
COL13A1-210ENST00000517713 HSP90AB4PQ58FF6 505 aa32.69■■■□□ 2.82
COL13A1-210ENST00000517713 RHPN1Q8TCX5 695 aa32.68■■■□□ 2.82
COL13A1-210ENST00000517713 KIF1BPQ96EK5 621 aa32.68■■■□□ 2.82
COL13A1-210ENST00000517713 IL1RAPL2Q9NP60 686 aa32.68■■■□□ 2.82
COL13A1-210ENST00000517713 KCPQ6ZWJ8 1503 aa32.67■■■□□ 2.82
COL13A1-210ENST00000517713 NEURL1BA8MQ27 555 aa32.67■■■□□ 2.82
COL13A1-210ENST00000517713 MYD88Q99836 296 aa32.67■■■□□ 2.82
COL13A1-210ENST00000517713 ERBB4Q15303 1308 aa32.67■■■□□ 2.82
COL13A1-210ENST00000517713 TSHZ3Q63HK5 1081 aa32.66■■■□□ 2.82
COL13A1-210ENST00000517713 SUCLG2Q96I99 432 aa32.66■■■□□ 2.82
COL13A1-210ENST00000517713 COL16A1Q07092 1604 aaPredicted RBP32.65■■■□□ 2.82
COL13A1-210ENST00000517713 AOX1Q06278 1338 aa32.64■■■□□ 2.82
COL13A1-210ENST00000517713 GCKRQ14397 625 aa32.64■■■□□ 2.82
COL13A1-210ENST00000517713 TOGARAM1Q9Y4F4 1720 aa32.64■■■□□ 2.82
COL13A1-210ENST00000517713 TUBGCP6Q96RT7 1819 aa32.63■■■□□ 2.81
COL13A1-210ENST00000517713 TNS2Q63HR2 1409 aa32.63■■■□□ 2.81
COL13A1-210ENST00000517713 KAZALD1Q96I82 304 aa32.63■■■□□ 2.81
COL13A1-210ENST00000517713 KIF2CQ99661 725 aa32.62■■■□□ 2.81
COL13A1-210ENST00000517713 TMOD3Q9NYL9 352 aa32.62■■■□□ 2.81
COL13A1-210ENST00000517713 PTCD1O75127 700 aaKnown RBP32.61■■■□□ 2.81
COL13A1-210ENST00000517713 RTL5Q5HYW3 569 aaPredicted RBP32.61■■■□□ 2.81
COL13A1-210ENST00000517713 BICC1Q9H694 974 aaKnown RBP32.61■■■□□ 2.81
COL13A1-210ENST00000517713 NBPF26B4DH59 902 aa32.61■■■□□ 2.81
COL13A1-210ENST00000517713 NBPF14Q5TI25 921 aa32.61■■■□□ 2.81
COL13A1-210ENST00000517713 NBPF10Q6P3W6 841 aaKnown RBP32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms